Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0100 |
Symbol | |
ID | 6876050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 92056 |
End bp | 94248 |
Gene Length | 2193 bp |
Protein Length | 730 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642787979 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_002218568 |
Protein GI | 198282247 |
COG category | [C] Energy production and conversion [S] Function unknown |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACAGGG CAGAGCGAAG CCTCCGCGAC CTCGCCACCC GGTGGCTGCC GGCTCCGACA GGCGCCCTCG CTGCCACCTA CCGCTTGCTG GAGCATTCGG GCGGACCTGT GGTGGACCTC CTGATCCGCC TGTGGCTGGC GAAAGTCTTT TTTGTGTCGG GCGTATTAAG GATTTTCGGC CTGAGCATCG AGCCCTACCT GTCCGGTGCG GCATATCCCG TGCCGTGGGT GGAGCCGCTC AGCCCCACCT ATCTGGGCGC CGCGATACAG ATGATCATCC CGATGTTGCT CGCGCTGGGG TTGGCAACCC GGTGGGCCGC GCTGTACATG CTCATTCTCG TGCTGGTGGT CCAGTTCAAC TACCTCGCTC TGGATATCAA CCTGTACTCG GCGGTGCTGT TCGGGTGGTT CGTGATATGT GGTGCGGGGC CACTGTCGCT GGACCATCTC CTCGCCCGAG GATTGGGGGA TACCGCGCTG CCCTTCGCCA CGGCGCTGAC CCGCCTGGCG GGCGCCGTTA CGCGATATCT CAGGCCGTAC TATCAATTGC TTATCCGTCT GTGGCTTGGG TTGGCACTGC TGGCGGCAAG TACGGAAACC TCGATACCCG TCGGGCTGAC AAAGCTGCTT CCGGAAAAGT CGCTGGCCCA TTTTGCCCCG GCGCCCACGC TGGCGCTGGT GGGCGCGCTG CTCGTGACTT TCGGCCTGGC CGCCCGCCCC GCCGCACTAC TGCTTATGCT GGCCGTTGCC GGGATGCATG CAGCCGGCGC GGCTGATCCG GCGGATGTCT ATTTCATGAT GACGCTGGCA CTGGTTGGCC TGTATGGGCC GGGCGATCTG TCGCTCGACA AATGGATTTC GGCTATCCTC CCGCAGATCA GCGGCAGGCA GACATGTCCG CCGGAGGGTG CGCCGCACGT GGTGATCGTG GGCGCCGGCT TCGGTGGGCT GGCATGCGCG GCGCGGTTGA CCAAAACGCC GGTGCGGGTG ACCCTGATCG ATCGCCATAA CTACCACTTG TTCCAGCCCT TGTTATATCA GGTCGCCACG GCTTCGCTTT CCCCTGCCGA TATCGCCGCT ACGGTGCGTG GCCTGTTTTG CGATCACCTC AACGTACAGG TGCTGCTGGG TCAGGTGACC GGGATCGATA CCACGCAACG GGCGGTGTTG ATCGGCAAAC GACGCCTGTC ATACGATTAC CTGGTGCTTG CTACGGGCGC GTCCCACAGC TATTTCGGAC GGGACGAGTG GGAGCCTTAT GCGCCGGGAT TGAAGACCAT CGACGATGCG GTGGAAATAC GGCGACGGAT TCTCTCCGCC TTCGAACAGG CGGAATCTGC CGAAGATCCC GCCGAGCGTC TGGGCCTGCT CACCTTTGTG ATTGTGGGAG GCGGACCAAC AGGGGTCGAG CTGGCAGGCG ACATTGCCGA ACTGGTGCGC CACGGCATGG AGAAGGAGTT CCACTATTTC GACCCGGCCA GCGCCCGCGT GGTTCTGATT CAGTCGGCTG CGCGCATCCT GCCGACTTTT CCCGGAGTAT TATCAGAAAA GGCGCAGCGC TCACTCGAAC GGCTGGGCGT CGAGGTCATG CTGGAAAGCA GGGTAGAGCA CATTGATCAG GAGGGAGTGC GCATCAACGG CGAACGCCTG GCGTCTCGCA CGGTATTGTG GGCGGCGGGG GTCGTGGCAT CCCCGGCGGC GCGATGGCTC AACGCTGCAG CCGACCGCAG CGGCAGGGTG AAAGTCGAAC CGGACCTCTC GGTAGCCGGT CTGCCAAACG TGTTTGTCAT CGGTGACACC GCGCTGGCCA ATGCCTGGAA GGGAAAACCG GTGCCCGGCC TGGCACCGGC GGCGAAGCAG GGCGGGGCCT ACGTGGCAAG AACGATTCGC CGAAAACTAC AAGGACAGTC GGAGCAACCG CCATTTGCAT ACCGCCACAT GGGCAGCCTC GCCACCATCG GCAGGAAAGC TGCAGTGGCA AGCTTCAACG GCGTCAACGT GAGCGGCGCA TCGGCCTGGT GGCTATGGGG CCTGATTCAT GTAGCTCTTC TCGTGGGTTT GCGCAACCGC ATCTCGGTGA TGTTCAACTG GTTCTGGGCC TATCTCACGT TCAAACGGGG CACCCGCCTG ATCACGGGAA ACGAGGCGTC TCTGGCAGAA AATCCTGTCA TAAGGACCAT CGAACGGCCC TGA
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Protein sequence | MNRAERSLRD LATRWLPAPT GALAATYRLL EHSGGPVVDL LIRLWLAKVF FVSGVLRIFG LSIEPYLSGA AYPVPWVEPL SPTYLGAAIQ MIIPMLLALG LATRWAALYM LILVLVVQFN YLALDINLYS AVLFGWFVIC GAGPLSLDHL LARGLGDTAL PFATALTRLA GAVTRYLRPY YQLLIRLWLG LALLAASTET SIPVGLTKLL PEKSLAHFAP APTLALVGAL LVTFGLAARP AALLLMLAVA GMHAAGAADP ADVYFMMTLA LVGLYGPGDL SLDKWISAIL PQISGRQTCP PEGAPHVVIV GAGFGGLACA ARLTKTPVRV TLIDRHNYHL FQPLLYQVAT ASLSPADIAA TVRGLFCDHL NVQVLLGQVT GIDTTQRAVL IGKRRLSYDY LVLATGASHS YFGRDEWEPY APGLKTIDDA VEIRRRILSA FEQAESAEDP AERLGLLTFV IVGGGPTGVE LAGDIAELVR HGMEKEFHYF DPASARVVLI QSAARILPTF PGVLSEKAQR SLERLGVEVM LESRVEHIDQ EGVRINGERL ASRTVLWAAG VVASPAARWL NAAADRSGRV KVEPDLSVAG LPNVFVIGDT ALANAWKGKP VPGLAPAAKQ GGAYVARTIR RKLQGQSEQP PFAYRHMGSL ATIGRKAAVA SFNGVNVSGA SAWWLWGLIH VALLVGLRNR ISVMFNWFWA YLTFKRGTRL ITGNEASLAE NPVIRTIERP
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