Gene Lferr_0094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0094 
Symbol 
ID6876044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp88715 
End bp89878 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content59% 
IMG OID642787974 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_002218563 
Protein GI198282242 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGAG AAGCGACAGG CCATTACGAA ACCAGCACAG CCGGGGGAGA GACTGTCCGT 
TCCTTCATAC CTGACGCGCT GCCTCCTGTG CCGCCGCTGG AACTGAATGG TACCCGACAG
GCGGCGCTGG AGCGGGCCAC TCTTGCCTTG GGGCGTCTTG ACAGCATCGC CCTGCTGCTG
CCAGATCCAC AGCTTTTCCT CTATGCATAT GTTCGGCGCG AAGCGGTGCT TTCCTCGCAG
ATCGAAGGAA TCCAGTCCTC ACTGTCTGAC TTGCTGCTAT TCGAGTTGGA TGAAACCCCC
GGCGTACCAT TCGACGACGT CGTGGAAGTT TCCAACTACG TCGCCGCCCT GGAGTTTGGC
ATGGACCGGC TGCGTGAAGG CTTTCCTCTT TGCAACCGGC TGCTGCGTGA GATACATGTT
CACCTGATGG CGCGGGGACG CGGCGCGGAA AAGGCTCCAG GCGAATTCCG CCGTACCCAG
AACTGGATCG GCGGCACTCG GCTTGGCAAT GCCCGCTTCG TGCCTCCGCC GCCGCAGGAG
GTTGAGTCCT GCATGGCGGC GTTGGAGCGC TTCATCCATG ACGATGGAAC CACCCTTCCT
GTATTGCTGA AAGCGGCGCT CGCTCATGTC CAGTTCGAGA CCATCCACCC CTTTCTGGAT
GGCAACGGCC GCCTGGGCCG GTTATTGATC GCCATGCTGT TGCATGAAGG TGGCCTGTTG
ATTCAGCCCA TGCTCTACCT TAGCCTCTAC TTCAAGCAGC ACCGCGATAT GTACTATGAG
CTGCTGGATG GTGTGCGTCG CCACGGCGAT TGGGAAGCCT GGGTTGACTT CTTTCTCGAA
GGTGTGGAAT TAACGGCCAC GGGCGCGGTG AACACCGCCC GCCGCCTGGT GGATCTGTTC
CAGCAGGATA GCCATCGTGT ACGGGCCGTC GGACGTGGGG CCGCAAATTT CCTGCGAGTA
CTCGAAGCAC TACGCCAGCG CCCCCTGAAC GACCTTGGTC AGATCAGTCG GCAAGCTGGC
ATCAGTTTCC CCACAGCTTC CAAGGCTATG ATGGCGTTGG TTGAAATAGG CATCGCTCGC
GAACTGACCG GTCGGCGCCG CAATCGTGTT TTTGTGTACG ACGCCTACAT GAATATTCTC
AATGAAGGGG GAGAGGCATT ATGA
 
Protein sequence
MFREATGHYE TSTAGGETVR SFIPDALPPV PPLELNGTRQ AALERATLAL GRLDSIALLL 
PDPQLFLYAY VRREAVLSSQ IEGIQSSLSD LLLFELDETP GVPFDDVVEV SNYVAALEFG
MDRLREGFPL CNRLLREIHV HLMARGRGAE KAPGEFRRTQ NWIGGTRLGN ARFVPPPPQE
VESCMAALER FIHDDGTTLP VLLKAALAHV QFETIHPFLD GNGRLGRLLI AMLLHEGGLL
IQPMLYLSLY FKQHRDMYYE LLDGVRRHGD WEAWVDFFLE GVELTATGAV NTARRLVDLF
QQDSHRVRAV GRGAANFLRV LEALRQRPLN DLGQISRQAG ISFPTASKAM MALVEIGIAR
ELTGRRRNRV FVYDAYMNIL NEGGEAL