Gene Lferr_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0085 
Symbol 
ID6876034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp84379 
End bp85305 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content56% 
IMG OID642787964 
Productglycosyl transferase family 2 
Protein accessionYP_002218554 
Protein GI198282233 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0285695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCAA ATAAAGTTGC AGTGATCATT CCAACGTGGA ACGGTGGCGA AGTCTGGTTG 
CGCTGCCTCG ATGCCTTACG CCAGCAGATT CCACCGCCAG GGTATGTGTT GGTTGTAGAC
TCTGGCTCGA AAGATGGAAC GGATGCGGCC GCATTGAAAG ATGGTTTTGA TGTCCTGCTC
TTGGCCAAGG GGACATTCGA CCACGGAGGT ACGCGGCAGA TGGCTGCCGA ACGGCTGGCG
GCATTTAATG TGCTGGTTTA TCTCACCCAG GATGCGGTGC TGGCAGATCC CAATGCCTTG
GCGCAGTTGG TGGCGCCATT TGCTGATCCC CGAGTAGGCG CTACTTATGG GCGCCAGTTG
CCTAGGCTGG GCTCCGGCGC TATAGAGGCC CATGCGCGGC TTTTCAATTA TCCACCTCGG
TCGACTAAGC GAACCATTGC AGACAAGGCA CGTATGGGTA TCAAGGCGGC TTTTACTTCC
AATTCCTTTG CGGCTTATCG CACAGAAGCG CTCATGGCGG TTGGAGGCTT TCCCCAAAGC
CTGATTCTGG GTGAAGACAT GGTGGTGGCC GCTCGTATGC TACAGGCAGG GTGGACCATC
GCATATGTGG CCGAGGCCCA GGTGAGGCAC TCGCATGGCT ATAGCGTGGC GCAGGAGTTT
AAGCGCTATT TTGATATTGG CGTGATGCAT CAGGACCAGG CGTGGATTCT TCGGGATTTT
GGAAAGCCGG AAGGCGAGGG CGGCCGCTTC GTGCGTTCCG AGATTGCCTA TCTCCTACGG
CATGCGCCTT GGTTACTGCC GTCTGCTTTT ATTCGCACCT TGGCCAAATA TCTGGGATAT
AAGCTTGGCC AGCATTCGTC CTCGCTGGCC TTGCCCATCA AGCGAAAACT GAGCATGCAC
CAAGGTTTTT GGGATAAGCA TGGGTAG
 
Protein sequence
MSANKVAVII PTWNGGEVWL RCLDALRQQI PPPGYVLVVD SGSKDGTDAA ALKDGFDVLL 
LAKGTFDHGG TRQMAAERLA AFNVLVYLTQ DAVLADPNAL AQLVAPFADP RVGATYGRQL
PRLGSGAIEA HARLFNYPPR STKRTIADKA RMGIKAAFTS NSFAAYRTEA LMAVGGFPQS
LILGEDMVVA ARMLQAGWTI AYVAEAQVRH SHGYSVAQEF KRYFDIGVMH QDQAWILRDF
GKPEGEGGRF VRSEIAYLLR HAPWLLPSAF IRTLAKYLGY KLGQHSSSLA LPIKRKLSMH
QGFWDKHG