| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0080 |
|---|
| Symbol | |
|---|
| ID | 6876029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 78653 |
|---|
| End bp | 79714 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642787959 |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_002218549 |
|---|
| Protein GI | 198282228 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCATG AACAGATAGA AAGTCAGCCC TGGCCCCAGG AAGGTCTGGA GCGAGTAGAA
CGCTGCCCGA TCTGCGGTGA GGTAGACCGA GCGCTGCTTC ATGACGGGCT GACGGACAAG
ATATTTTTTT GCGCGCCGGG GCGGTGGTCA CTATATCAAT GCCCGACCTG TGGTGCCGCC
TACCTGGACC CAAGGCCGAC CCCTGCCACC ATAGCCATGG CTTATAGTGA CTACTACACC
CATGAAGAAG GGGATGATGC CCCCAAGGGA AGATTCGCGC ATTTAAAGCG CCGTTTGCGC
AATGATTACC TCAATGCCCG CTATAATGCC GATCTCCAGC CTGCATGGAA GGTCGGGCGA
TGGATCACCC CCCTGTTGGG CCGAAAACGA AAGCAGATAG ACGAAAGCGT TCGCCACCTG
CCCGCCACTG GAAAACCGGG TGTGCTGGTA GACATTGGCT GTGGCAATGG TCAGTTCCTC
GGCGTCGCCA TGCAGCTGGG TTGGGAAGCT TGGGGCGTTG ATCTCGATCC CAAAGCAGTG
AAAACTGCGC AGAAGACGGG GGCCACCGTC ATACAGGGCG GCTTTCCAGA CACTGGCCTA
CCTTCTGCAC ACTTCGATAT TGTGACGCTC AGCCATGTGA TTGAACACGT TCATGACCCC
CTAGCTGCGC TTCGGGAAGC ATTTCGAGTA CTTAAACCTG GTGGACACCT CTGGCTTGCC
ACGCCAAACA TGGGGAGTTT CGGCCACGTG CGCTTCGGTG CCGATTGGAG AGGGCTTGAG
CCGCCGCGGC ACCTCGTCCT TTTTAACAAT AATAGCCTAG AAATAGCGTT AGATGGCGCT
GGATTTATAG ATATTAAGCA AAAGCCCTGT CTGGCGCAGG CAGCATGGTT TTACCAAAGC
AGTTTGCGTA TCTCTCGTTG TCAAGATCCG TACGATGCTA GCGCAAGTGG CTTGCCCCTA
ACTCTGTGGA TTGCAGCCAA GCTCGTTGAT TTCAGAGTGG CGGTGTCACC CTTTCGCTGT
GAGAGCATCG TGGTAACCGC GAAACGGCCA GAATCCGATT AA
|
|---|
| Protein sequence | MDHEQIESQP WPQEGLERVE RCPICGEVDR ALLHDGLTDK IFFCAPGRWS LYQCPTCGAA
YLDPRPTPAT IAMAYSDYYT HEEGDDAPKG RFAHLKRRLR NDYLNARYNA DLQPAWKVGR
WITPLLGRKR KQIDESVRHL PATGKPGVLV DIGCGNGQFL GVAMQLGWEA WGVDLDPKAV
KTAQKTGATV IQGGFPDTGL PSAHFDIVTL SHVIEHVHDP LAALREAFRV LKPGGHLWLA
TPNMGSFGHV RFGADWRGLE PPRHLVLFNN NSLEIALDGA GFIDIKQKPC LAQAAWFYQS
SLRISRCQDP YDASASGLPL TLWIAAKLVD FRVAVSPFRC ESIVVTAKRP ESD
|
|---|
| |