| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0079 |
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| Symbol | |
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| ID | 6876028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 77164 |
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| End bp | 78663 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642787958 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_002218548 |
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| Protein GI | 198282227 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.75242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCC CCCACCCCCG TATCGCCCGC TCCACCCTCA TCAATCTGGT GGGCGCTGCC
ATACCTGCCG CTCTGCTGTT AATCACTGTA CCCATCTATC TTCACCTCAT AGGTGAAGCC
CGCTACGGCG TCCTTGCCAT AGTCTGGCTG CTGCTTGGCT ACTTTGGGGT ATTTGATTTT
GGATTCGGGC GGGCAGTCGC CAACCGCATC GCCGCCCTCC ACGACGCTAC GGCCGAAGAG
CGACAGGGTA TTTTTTGGAC CGGATTAGCG ATCAGTGCCG TTACCGGCCT CATTGGCGGA
GCCATTCTCT ATCTGCTTGG GGATTGGCTG TTTGCTCATG TTTTCCACAT CTCCGGCTCT
TTGCGAATCG AAGCGGAAAA TGCAATGCCG TGGTTGGCAC TTGCGTTGCC ACTAGCCATT
ATTATCTCGC TGCTGGCAGG CGCCCTGGAA GGGCGACAAG CCTTTCTCGC GCTTAATGGA
GCACAAATTT TTGGTACGGT GCTCTATCAG CTTTTCCCGT TAGTTGTAGC CTATGCGGGA
TGGATAACGC TACCTTATTT GATATCGGCC GCCATTGTCG GACGGCTATT GAGCGTCCTA
TTACTTTTCG CTCTTAGCTA TCGCCATGTA CCCCTGTCGC CACGCCCCCG CTTTGCCCTC
CATCAGGTGA AATCCTTGCT GCACTACGGC GGCTGGATCA CGGTCACCGG GCTGGTCGGC
CCCCTGTTGA CCGTTTTTGA CCGCTTCCTC ATTGGCGCCA AGGTGGGCAT GGTGGCAGTC
ACCGCTTACA CTGTGCCTTA TAACCTTGTC ATGCGGCTCT CCATTCTTCC TGGCAGCCTA
CAAACTGCAT TGTTCCCCAG ATTTGCCATG GTGGACCCCA CCGAGGCAAA GGTGCTGGCG
GCGCGTGCCA TATTATCCAT AGGGGCTATC ATGACCCCGA TAGTGGTGAT AGGGTTGCTG
CTCATCAAAC CCTTTCTGAT CCTTTGGGTG GGCGCAGCGC TGGCGGAAAA AACCGCCCCG
GTCGGACAAA TACTACTCGT CGGGATATGG ATCAATACCC TGGCCATTAT TCCCTTTACC
TATCTCCAAG GCAGAGGGCG CCCCGATTTG CCCGCCAAGT TCCATGTCCT GGAGCTTCTT
CCCTACGTTG CTATCCTGTG GGTGCTTATC GACCGGCTTG GCATACCGGG CGCCGCTTGG
GCCTGGGATC TGCGTGTCCT TGCGGATACC CTGCTCTTGT TCTGGGCGGC GCAGACTACC
TCCGGCTTGA ACCGCACCAT GGCTGGTATC CTGCCCATTA CCGGGGCCTT CGTTATTGCC
TTTGAAATGC CTTATGACTC TGCCCTGTAT GTGGGGATTT CGCTACTGTT GGCAGGTGCA
AGCATTGGCT GGTCCATTGC CAGCATTCCT CAAGATCAAC GCACCACCCT CTCGCGTCGC
CTTTTGGCGC GAACGCCTCC TGTCAACTCA ACGGTCTCGC AGGAAAAACA TGGATCATGA
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| Protein sequence | MTAPHPRIAR STLINLVGAA IPAALLLITV PIYLHLIGEA RYGVLAIVWL LLGYFGVFDF
GFGRAVANRI AALHDATAEE RQGIFWTGLA ISAVTGLIGG AILYLLGDWL FAHVFHISGS
LRIEAENAMP WLALALPLAI IISLLAGALE GRQAFLALNG AQIFGTVLYQ LFPLVVAYAG
WITLPYLISA AIVGRLLSVL LLFALSYRHV PLSPRPRFAL HQVKSLLHYG GWITVTGLVG
PLLTVFDRFL IGAKVGMVAV TAYTVPYNLV MRLSILPGSL QTALFPRFAM VDPTEAKVLA
ARAILSIGAI MTPIVVIGLL LIKPFLILWV GAALAEKTAP VGQILLVGIW INTLAIIPFT
YLQGRGRPDL PAKFHVLELL PYVAILWVLI DRLGIPGAAW AWDLRVLADT LLLFWAAQTT
SGLNRTMAGI LPITGAFVIA FEMPYDSALY VGISLLLAGA SIGWSIASIP QDQRTTLSRR
LLARTPPVNS TVSQEKHGS
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