| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0075 |
|---|
| Symbol | |
|---|
| ID | 6876024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 74064 |
|---|
| End bp | 75482 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642787954 |
|---|
| Product | Undecaprenyl-phosphate galactose phosphotransferase, WbaP |
|---|
| Protein accession | YP_002218544 |
|---|
| Protein GI | 198282223 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | [TIGR03022] Undecaprenyl-phosphate galactose phosphotransferase, WbaP
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.665928 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCTTATG CGCTGGTGCT GGGCGATGTG CTGGCGCTTT TGGCCGCCTT TTATCTTGGC
CGCCTTTCCC ACGCCTTCTA TTACCACCTG AGTCCCGGCT GGGTGCTGCT CTACTGGTGG
GGGAGCCTTG CGCAAGTCAA TGTGCTTCTG TTCCTGTTGC TGATGGCTCT GGGCATTACC
GCCTTCGCCG TCAAGGGGCA TTATGCCCGG CGCAAGGCTT TTTGGGACGA GGCTGGTGAA
GTGCTGGGCG TGTTCACGCT CTTGCTGGCA TTGAATGCCA CCATTGCCTT TTCCGGCAAA
TGGCCTCTGT CACGGCTATG GCTTTTTTCC ACCTGGGTGC TGGCGCTGGT GCTGTTGCCC
CTGGCCCGAT GGCTGGTACA CCATATCTTG CAGCGCCTGG GCGTGTGGAT GCGGCCCGTG
GTGGTCGTTG GCTGCGGACG GAACGCCGCC GAGGCCATCC GCGCCCTGGA CAGCGAACCC
ATGCTGGGCT ATGCCGTACA ACGGGTGCTG ACGCCGGGGG GGTGCGATCC GGCTTCTGGC
GAACTTCCCA CCCAGGCGCC CATGGAAGCT CTGGGAGACG ATCCGTTGGC TACCCTGGCC
CGTCTGGGCA AACCCCATGT CGTGCTGGCC CTGGACATGG ATCAGTGGGA CGCGCAGGAA
AAACTGGTGC GCTCCCTGGG GCTCAGCTAC CCCAACCTTA CCGTGGTGCC GCCCTTGCGC
GGTCTGCCTC TGTTTGGCAT GGAGGCCATG CATTTTTTTG GCCACGAGGT GCTGATGCTG
CGGGTGCGGG ACAACCTGGC CCGGCCGGGT CCGCGCATCG CCAAACGCCT TTTTGACCTG
CTGGCCGCGT CGTTGCTCGT CGTTCTGCTG TCGCCGCTGC TCCTCTACGT CGCCTGGCGT
ATACGCAGGG AGGATGGCGG GCCGGTATTT TTTATCCAGG AGCGTGTGGG ACGAGGGGGT
GGCACCTTTG GTTGCCTGAA ATTCCGCAGC ATGGTGATGG ATGCGGAGGA CCGCCTGAAA
CAATACCTGC ATAGTCACCC CGAACTGGCC GCCGAGTACG AAAGAAATTT CAAGCTGCGC
AACGATCCCC GGGTGACCCG GATCGGGAAG TTTCTGCGGC GTGGCAGCCT GGATGAGTTG
CCCCAGTTGT TCAATGTGTT GCGTGGCGAC ATGAGTCTGG TGGGCCCGCG CCCATTATTG
GCTCGGGAGC TTGACCGTTA CGGCGACAAT ATCTGCCTGT ATCATATGGT TTATCCGGGT
ATTACCGGTT TGTGGCAGGT CAGCGGCCGT TCCGAGACCA CCTTTGACGA ACGCGCCTAC
CTCGATGCCT GGTATATCAA GAACTGGACG CTCTGGTACG ACATCGTCAT CCTGCTCCTG
ACGGTGAAGG TGGTCTTGCG GCGGGAGGGG GCTTATTGA
|
|---|
| Protein sequence | MPYALVLGDV LALLAAFYLG RLSHAFYYHL SPGWVLLYWW GSLAQVNVLL FLLLMALGIT
AFAVKGHYAR RKAFWDEAGE VLGVFTLLLA LNATIAFSGK WPLSRLWLFS TWVLALVLLP
LARWLVHHIL QRLGVWMRPV VVVGCGRNAA EAIRALDSEP MLGYAVQRVL TPGGCDPASG
ELPTQAPMEA LGDDPLATLA RLGKPHVVLA LDMDQWDAQE KLVRSLGLSY PNLTVVPPLR
GLPLFGMEAM HFFGHEVLML RVRDNLARPG PRIAKRLFDL LAASLLVVLL SPLLLYVAWR
IRREDGGPVF FIQERVGRGG GTFGCLKFRS MVMDAEDRLK QYLHSHPELA AEYERNFKLR
NDPRVTRIGK FLRRGSLDEL PQLFNVLRGD MSLVGPRPLL ARELDRYGDN ICLYHMVYPG
ITGLWQVSGR SETTFDERAY LDAWYIKNWT LWYDIVILLL TVKVVLRREG AY
|
|---|
| |