Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0070 |
Symbol | |
ID | 6876019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 71382 |
End bp | 72026 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642787949 |
Product | Radical SAM domain protein |
Protein accession | YP_002218539 |
Protein GI | 198282218 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0602] Organic radical activating enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.457092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGGGC GGCTCCGCAT CACGGAAATC TTCCACAGCC TGCAAGGGGA AACCCGCAGC GTCGGGCGTC CGGCGACCTT TGTGCGTCTC ACGGGCTGCC CTTTGCGTTG CCGTTACTGC GATACCGCCT ATGCGTTTCA TGGCGGCGAG TGGCGGCGGA TCCCCGAGAT TCTGGAACAG GTGCGCGCGG GGGGAAACCG GCTGGTGGTG GTGACGGGTG GCGAACCATT GGCACAGGCC GATGTGTTGC CGCTGATGAC GCAGCTTTGC GATGCGGGCC ATGAAGTCTT TCTGGAAACC AGCGGCGCCC TTTCACTGGC GGGGGTGGAT ACCCGGGTGG TGAAGGTGCT CGACCTCAAA AGCCCCGATT CCGGGGAGTG CGAACGCAAT CTCTGGGAAA ACCTGCCCTT ACTCAACCCG CAGGACCAGA TTAAATTTGT GCTGTGCAGC CGTGCCGATT ACGACTGGGC CAAGGAGGTG CTCGCTCGGG AGGCATTGGC CGAACGCTGC GAAATACTCT TTTCTCCCAG CCATGGCACG CTCGCCCTGC GCGATCTCGC CGAATGGATG CTCGCCGACC ATTTGCCGGT ACGCCTGCAG ATTCAGTTGC ACAAACTGAT CTGGGGCGAC CTGCCCGGAC ACTGA
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Protein sequence | MEGRLRITEI FHSLQGETRS VGRPATFVRL TGCPLRCRYC DTAYAFHGGE WRRIPEILEQ VRAGGNRLVV VTGGEPLAQA DVLPLMTQLC DAGHEVFLET SGALSLAGVD TRVVKVLDLK SPDSGECERN LWENLPLLNP QDQIKFVLCS RADYDWAKEV LAREALAERC EILFSPSHGT LALRDLAEWM LADHLPVRLQ IQLHKLIWGD LPGH
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