Gene Lferr_0070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0070 
Symbol 
ID6876019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp71382 
End bp72026 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content62% 
IMG OID642787949 
ProductRadical SAM domain protein 
Protein accessionYP_002218539 
Protein GI198282218 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.457092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGGGC GGCTCCGCAT CACGGAAATC TTCCACAGCC TGCAAGGGGA AACCCGCAGC 
GTCGGGCGTC CGGCGACCTT TGTGCGTCTC ACGGGCTGCC CTTTGCGTTG CCGTTACTGC
GATACCGCCT ATGCGTTTCA TGGCGGCGAG TGGCGGCGGA TCCCCGAGAT TCTGGAACAG
GTGCGCGCGG GGGGAAACCG GCTGGTGGTG GTGACGGGTG GCGAACCATT GGCACAGGCC
GATGTGTTGC CGCTGATGAC GCAGCTTTGC GATGCGGGCC ATGAAGTCTT TCTGGAAACC
AGCGGCGCCC TTTCACTGGC GGGGGTGGAT ACCCGGGTGG TGAAGGTGCT CGACCTCAAA
AGCCCCGATT CCGGGGAGTG CGAACGCAAT CTCTGGGAAA ACCTGCCCTT ACTCAACCCG
CAGGACCAGA TTAAATTTGT GCTGTGCAGC CGTGCCGATT ACGACTGGGC CAAGGAGGTG
CTCGCTCGGG AGGCATTGGC CGAACGCTGC GAAATACTCT TTTCTCCCAG CCATGGCACG
CTCGCCCTGC GCGATCTCGC CGAATGGATG CTCGCCGACC ATTTGCCGGT ACGCCTGCAG
ATTCAGTTGC ACAAACTGAT CTGGGGCGAC CTGCCCGGAC ACTGA
 
Protein sequence
MEGRLRITEI FHSLQGETRS VGRPATFVRL TGCPLRCRYC DTAYAFHGGE WRRIPEILEQ 
VRAGGNRLVV VTGGEPLAQA DVLPLMTQLC DAGHEVFLET SGALSLAGVD TRVVKVLDLK
SPDSGECERN LWENLPLLNP QDQIKFVLCS RADYDWAKEV LAREALAERC EILFSPSHGT
LALRDLAEWM LADHLPVRLQ IQLHKLIWGD LPGH