Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0065 |
Symbol | |
ID | 6876014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 67329 |
End bp | 68030 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642787944 |
Product | protein TolQ |
Protein accession | YP_002218534 |
Protein GI | 198282213 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | [TIGR02796] TolQ protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.566643 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.905632 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATCCGC ATAGCATCGC CAACACCGCG CAGTCCCTCT CCCTGGGTCA TCTGGTCATG AACGCCAGTT GGGTCGTGCA GGGCATCCTC GCCATACTGA TGATCGCGTC CGTCATCTCG TGGACCATCA TCTTCCAGAA GTGGGCCATT TTTGCCGCCG CCCAGCGTGC CCTGGAGCGA TTCGAGAAGC GCTTCTGGAG CGGTGGCGAG ATGAGCCAGA TTTACCAGCA CGTTTCCGGT AACGCCAACC TGGAAACCGG GGCCGGCAGC ATCTTCTGCG CCGGTTATGA AGAATTCCAG CGTCAGCGCA ACAAGATTCG TCCCAGCGAT GCCCTCGATG CAGCGCGGCG CGCCATGCGG GTGGCTCAGA TGCGCGAGGT CGGGCGCCTG GAAAACAATC TCGCCTTTCT TGCCTCCGTA TCTTCCGTAA GCCCTTTTAT CGGCCTTTTC GGTACCGTCT GGGGCATCAT GACCGCCTTC ATGAATATCG GCATGGCGGG ACAGGCCACC CTGGCGACGG TGGCGCCTCC CGTCGCCGAA GCCCTCATCG CCACCGCGGC GGGTCTGTTC GCCGCGATCC CGGCGACCGC AGCCTATAAC CGCTATATCC ACCAACTGGA CAAGCTCGAC GCGCAATACG AAGTCTTCAT GGACGAGTTC ACCAACATCC TGCACCGGCA GGTGCCCGAG ACGAAACCAT GA
|
Protein sequence | MDPHSIANTA QSLSLGHLVM NASWVVQGIL AILMIASVIS WTIIFQKWAI FAAAQRALER FEKRFWSGGE MSQIYQHVSG NANLETGAGS IFCAGYEEFQ RQRNKIRPSD ALDAARRAMR VAQMREVGRL ENNLAFLASV SSVSPFIGLF GTVWGIMTAF MNIGMAGQAT LATVAPPVAE ALIATAAGLF AAIPATAAYN RYIHQLDKLD AQYEVFMDEF TNILHRQVPE TKP
|
| |