Gene Lferr_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0053 
Symbol 
ID6876002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp57137 
End bp57919 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content65% 
IMG OID642787932 
Producthypothetical protein 
Protein accessionYP_002218522 
Protein GI198282201 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.137595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACGGC GAACCGTCTT CTTCCTGCGC GGTAGGAAAC GGGTTTCCGA AGAACGGAAA 
CGCCGGCGGA CGGGGGGTGA TGATTTCGCC CTCCGGTTAT TCGCACTCTG CGGCGTGGCG
ATGTTTACCT CCATAGGACC GGCCGGCGCC GACGCGGGCC TGAAGGCCGA CAGCACCCAG
CGACCGGGCG GCGGACCCGC GCCCAGCGTC GCGGGGAATG CAGGAACGTC TGCGGCGGTA
CCGCCCGCCG TCGGCGCCGG CCAGGTGTCA CCGCTATCCG GCGGGTTATG CATTTTTCCG
GGATGCCCTG AAAACCCGCT GGCGGATTGG ACCCGCGCGC CACAGAAGCA ACGATTCCTC
GCCAGAAAAT CAGCGCCCCG GAAACCCGCT CACCGGCGGG CCAAACGTGC CCTCCGCATC
CGTCTGAGGC CGGGGCACAG AGCCGTCGCC CTCCTGCGTC ACCATCCCGG CAGGCCCCAT
CCCATAGCCG GTGTGAACCG CAACCCCTAT ATGTCCAGGC GGCCGCTGCA CCTGGCCTTT
CCGCGTTACG GCACCGGTGC CCTTGCCGTC CAGAGCGGCC TGGAACTTGC GCCCATTTCC
AGGTACCGGT ACTCCTGGCG GAACGGATCG TATCTGACAC TGGGTGTGCA TGGCCATTAC
GGCATCGTGC GGGGCTGGGA TATCTTGTCC GGCGTAGACT ATGTCAGCCA CACGAAAGCC
CTTTCGCCAC AGGAGGTGGA TGACTCTCGC GCGTATATCG GGGTGATGCA CAAGTTCCAG
TGA
 
Protein sequence
MIRRTVFFLR GRKRVSEERK RRRTGGDDFA LRLFALCGVA MFTSIGPAGA DAGLKADSTQ 
RPGGGPAPSV AGNAGTSAAV PPAVGAGQVS PLSGGLCIFP GCPENPLADW TRAPQKQRFL
ARKSAPRKPA HRRAKRALRI RLRPGHRAVA LLRHHPGRPH PIAGVNRNPY MSRRPLHLAF
PRYGTGALAV QSGLELAPIS RYRYSWRNGS YLTLGVHGHY GIVRGWDILS GVDYVSHTKA
LSPQEVDDSR AYIGVMHKFQ