Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0053 |
Symbol | |
ID | 6876002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 57137 |
End bp | 57919 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642787932 |
Product | hypothetical protein |
Protein accession | YP_002218522 |
Protein GI | 198282201 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.137595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACGGC GAACCGTCTT CTTCCTGCGC GGTAGGAAAC GGGTTTCCGA AGAACGGAAA CGCCGGCGGA CGGGGGGTGA TGATTTCGCC CTCCGGTTAT TCGCACTCTG CGGCGTGGCG ATGTTTACCT CCATAGGACC GGCCGGCGCC GACGCGGGCC TGAAGGCCGA CAGCACCCAG CGACCGGGCG GCGGACCCGC GCCCAGCGTC GCGGGGAATG CAGGAACGTC TGCGGCGGTA CCGCCCGCCG TCGGCGCCGG CCAGGTGTCA CCGCTATCCG GCGGGTTATG CATTTTTCCG GGATGCCCTG AAAACCCGCT GGCGGATTGG ACCCGCGCGC CACAGAAGCA ACGATTCCTC GCCAGAAAAT CAGCGCCCCG GAAACCCGCT CACCGGCGGG CCAAACGTGC CCTCCGCATC CGTCTGAGGC CGGGGCACAG AGCCGTCGCC CTCCTGCGTC ACCATCCCGG CAGGCCCCAT CCCATAGCCG GTGTGAACCG CAACCCCTAT ATGTCCAGGC GGCCGCTGCA CCTGGCCTTT CCGCGTTACG GCACCGGTGC CCTTGCCGTC CAGAGCGGCC TGGAACTTGC GCCCATTTCC AGGTACCGGT ACTCCTGGCG GAACGGATCG TATCTGACAC TGGGTGTGCA TGGCCATTAC GGCATCGTGC GGGGCTGGGA TATCTTGTCC GGCGTAGACT ATGTCAGCCA CACGAAAGCC CTTTCGCCAC AGGAGGTGGA TGACTCTCGC GCGTATATCG GGGTGATGCA CAAGTTCCAG TGA
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Protein sequence | MIRRTVFFLR GRKRVSEERK RRRTGGDDFA LRLFALCGVA MFTSIGPAGA DAGLKADSTQ RPGGGPAPSV AGNAGTSAAV PPAVGAGQVS PLSGGLCIFP GCPENPLADW TRAPQKQRFL ARKSAPRKPA HRRAKRALRI RLRPGHRAVA LLRHHPGRPH PIAGVNRNPY MSRRPLHLAF PRYGTGALAV QSGLELAPIS RYRYSWRNGS YLTLGVHGHY GIVRGWDILS GVDYVSHTKA LSPQEVDDSR AYIGVMHKFQ
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