Gene Lferr_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0045 
Symbol 
ID6875994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp50692 
End bp51774 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content59% 
IMG OID642787924 
ProductTQO small subunit DoxD 
Protein accessionYP_002218514 
Protein GI198282193 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.191442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGA CCATGTCAAA TACCACCCCG CAGGACACGC CGGATCGCAG TTGGCGTTTC 
GCCGCCATCG CCCTTCTTGC CGTACGCTTC GTCCAGGGAT GGATCTACTG GGGCGGCGGG
ACCCGGCGTT TTATCTACGG CCCGCAAAAG CTGGACGTAC ATGGCCACTG GATGGCCTAC
AAATTTCAGA CGGCAATGCC CGGAGCCATA CTGGGCACGG ATCATCTGGT CGCTTTTTTA
TTGCATCATT TCACCCTGCT CTATGCTGGG GTGATCATTT TCAGCGCCGT TGAAATGATC
GCAGGCTTTA TGCTGATTGT CGGCTTGTAT ACCCGCCTCG CGGCGGTGGC CACCCTCGGT
TTGTCCTTCG TGCTGATGCT GCTGTTTGGT TGGCAGGGCG CCACCTGCAT CGATGAATGG
ACCATGGCTG CGTCCAACTT TGCCATGGGC ATCACGCTGT TTCTTGCGGG AAGCGGCGCG
TATTCCGTGG ACAACTGGCT CCTGTCGCGG AAACCGACGC TGGCCCAAAA TGGTCTGTTC
CGCTGGCTGG GGGGTGCCCT GCCTTTGCCT TTGAGCGATG GCGCCTTCAA GAAGCTCGCG
TTGACATTGT TCTGGATTGC CGTGGCCTTT ATCGTCGCCA CTTACAGTTA TTACCGCGGT
TCGGTGTTCA CGCCTTTTCA CGGTGGCCCA GTGAGTCCGG CGAAGCATCA CTGGAAGCTG
GACGGAGCCA CGCTGCAGAA GGGCGGTGGT GTGACATTCC ACGCCTATGT GGATTCCGGA
GTGGCCGCAG AGCCGTCCAA TGTGCTCGAG GCGGCGCTGA TCGATACCAG CACCGGGAAG
CCGGTGGAGA AGTGGGCCAG TTCGACCCTC TCCACGTTGC CAAAAAGCGC CTTTTCCAAC
GATTTTGCCT ACCAGCAGAT TCACACCGGG AAGTTCGGCA TTACCGGACC TGTCGGTGCG
CAGGCCACCG TACGCCTGCC GTCAACGATG CCAAGCGGGG TCACCATCGG TCAGGGCTCT
TACGTTCTCG AGCTGACCTC CGTAAACGGC CATGTATGGA AAGCGCCAGT GCAGCATCCA
TGA
 
Protein sequence
MATTMSNTTP QDTPDRSWRF AAIALLAVRF VQGWIYWGGG TRRFIYGPQK LDVHGHWMAY 
KFQTAMPGAI LGTDHLVAFL LHHFTLLYAG VIIFSAVEMI AGFMLIVGLY TRLAAVATLG
LSFVLMLLFG WQGATCIDEW TMAASNFAMG ITLFLAGSGA YSVDNWLLSR KPTLAQNGLF
RWLGGALPLP LSDGAFKKLA LTLFWIAVAF IVATYSYYRG SVFTPFHGGP VSPAKHHWKL
DGATLQKGGG VTFHAYVDSG VAAEPSNVLE AALIDTSTGK PVEKWASSTL STLPKSAFSN
DFAYQQIHTG KFGITGPVGA QATVRLPSTM PSGVTIGQGS YVLELTSVNG HVWKAPVQHP