Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0042 |
Symbol | |
ID | 6875991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 47544 |
End bp | 48752 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642787921 |
Product | C4-dicarboxylate transporter/malic acid transport protein |
Protein accession | YP_002218511 |
Protein GI | 198282190 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1275] Tellurite resistance protein and related permeases |
TIGRFAM ID | [TIGR00816] C4-dicarboxylate transporter/malic acid transport protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.120445 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAATC AATGCATGGC TAGGTTTTTA TCAGCAGTTC CTAATGGTGA TTTGCGCGAA GTGGTGCGCC ACTTTACACC AAACTGGTTT GCCGCGAACA TGGGGACAGG TATCCTGGCC CTGATGCTCG CCGATTTCCC ATACCATTTC TCCGGTCAGC TCGTGGTTGC GCGAGGGCTC TGGTCGATCA ACGTCTTTTT TTTCGGCCTT TTCACGGTAT TGTTTCTGGG GCGCGCCATT TTTTATCCGG CCGCCTTTCG TCGGCTCTTT GAACACCCCG TGCAGTCCCT GTTCATCGGG GCCATTCCCA TGGGATTTGC CACGATCGTC AACGGCATCT TCCTGCTGTG GCCGCTAACG CCCGAAACCA CCCTCGTTGC CCACTATCTC TGGTGGGTAG ACGTGGTCCT CTCGCTTTTT TCCGTGCTGG CAGTCCCTTA TTATATGTTT ACGACCCAGC ACCATGCCAT GGACCGCATG ACCGCGGCAT GGCTGCTGCC GGTGGTTCCG CCGGAGGTGG CGGCGGCAAG CGGCGGGATG CTGGCGGGGC ATCTGAGCAC GGGCGCGGCC GGCTGGGTGA TTTATACCAG TTACGTGCTT TGGGCCATTT CCGTGCCCCT GGCCTTTGCC ATACTGACGA TCCTCTTCCT CCGTCTGACC CTGCACAAAA TGCCGCACAT CGACATGGCC GTATCCGCCT GGCTGCCTCT CGGTCCCCTG GGCACCGGTT CACTGGCAAT GCTGGTGCTG GGTCCCTCTG ATCAGTATGC CTTTGCTAAC AGTTCCATGG CGGCAGTGGG TGCGTTGGGA GAGCCCGTTG GTATCATCAC GGGCCTCGTA TTGTGGGGTT TCGGGTTGTG GTGGATGGCG ATTGCCATAT TTTTCACCTT GCGCTATCTG AATGAGGGCC TACCCTTCAA CATGGGCTGG TGGGGTTTCA CCTTCCCTCT GGGCGTCTTT ACGGCGTCCA CCTATGCCCT GGCGAGGGAA ACGAGGTTCG TAGTGTTCGA TCATATCGGT GCCGCTTTTA CCATTCTCCT GGCCTTTTTC TGGGTGGTGG TGACCTGGCG GACCTTTGGC GGCATGTGGG TCGGGCGCCT GTTCCGCGAC CCCTCCCTTT CGGAAGAAAC CGCCATGTTG ATCGACAGCA AAGAAGATGT GCAGCGACTG ATTACAAAAG AGGATGTGAT CAAGGATCTT AGGAGTTGA
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Protein sequence | MGNQCMARFL SAVPNGDLRE VVRHFTPNWF AANMGTGILA LMLADFPYHF SGQLVVARGL WSINVFFFGL FTVLFLGRAI FYPAAFRRLF EHPVQSLFIG AIPMGFATIV NGIFLLWPLT PETTLVAHYL WWVDVVLSLF SVLAVPYYMF TTQHHAMDRM TAAWLLPVVP PEVAAASGGM LAGHLSTGAA GWVIYTSYVL WAISVPLAFA ILTILFLRLT LHKMPHIDMA VSAWLPLGPL GTGSLAMLVL GPSDQYAFAN SSMAAVGALG EPVGIITGLV LWGFGLWWMA IAIFFTLRYL NEGLPFNMGW WGFTFPLGVF TASTYALARE TRFVVFDHIG AAFTILLAFF WVVVTWRTFG GMWVGRLFRD PSLSEETAML IDSKEDVQRL ITKEDVIKDL RS
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