| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0040 |
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| Symbol | |
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| ID | 6875989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 43982 |
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| End bp | 45427 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642787919 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002218509 |
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| Protein GI | 198282188 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACCGTA AACGCTGGAT CGCCGCATGC GCGGCCCTCG GCGTCGTGGC CCTCGGCGGC
TGCGCGCCGA CCATCCGTGC CCCGAACCCC GCGGATGTCA AGGCGCCGGC CTGGGCGATG
AGCGTGCAAC GGATGGACGG CGCCCAGGCA TTGCCCACCG GCGCGTGGCC GCAACAGGAC
TGGTGGACGG GACTGGCCAG CGCCGGACTC GATCAAGTCA TGACCCGTGC CCTGAGCCCG
GCCAATCCGC GTTTGGCGGA GGCCGTCGAT ACGGTCCAGT GGGCGGCATC GGTCAGCACC
TGGCGGGCGG CGGCCCTCGG TCCGCAGCTT TCCGGGCAGG CGGCCATCAC GCCTTTGCAG
TTCAGCGGCA ACAGCCCGCT GGGGGCGCTC GGTCTGGGCA ACAAACTCTA TGACAGCGGC
GATATCGGCC TCGGTTTTAC GCAGGCGCTC GATTTCTGGG GCAAATATGC GGACCGCCTC
AAGGCGGCGC TGGGTGAACA ACGCGCCGCC GAAGCGCGGC TGGCGGACAC CCGCCGCCTG
CTCGCCGCCG CCGTCGTCAA TGCCTATCTG CGCTGGGCGG AAGCCGAACA GCAGCTCGCC
AGCACCCGGC GTTTACAGCA CCTCTACCAA CAGCGGCAAG CGTTGATACG AACCCGGCGG
TATCTCGGCC TCGGAACCGA CTTATCCATT GCCAGTCTGT CTTTGCAGAT CCAGCAGAAT
ACCGCCCGCC TGGCCCGCTG GCAGCAACGG GCGGCTGCCG CACGCTTCGC CGTGGCAGAG
CTCGCGGCGA TTGCACCGGA CGCCCTCCCG CCACGGCCGG TGGCGCCCGC GTCTGCAGTA
ATCCCCACCC TGCCCCCACA CCTGAGTCTG GACCTCCTTG CCCACCGCCC CGACGTGCAG
GCGGCTCGCG CGCTGGCGCG GGCCAGCGTC CAGCAGACCA AAGCCGCCCG CGCCGCTTTT
TATCCGGATA TTTCCTTCTC GGCCTTGCTG GACATGAACA GCGCCCACCT CGCCACGCTT
CTGAACCCGG CGAGCTTTGC CTACAGTTTT GGACCCGCCT TGCGGTTACC GATTTTCACC
AGCGGCGCCC TGACCGGCCG CTTCCGCGGC GCCGAGGCGC AGCAGGCCAA GGCGGTGGCC
GTTTACCAGG AAAGCATCCT GCAATCGGTC CGGCAGGTAC TGACGGCACT GTCGGGATAC
CAGCACGGCC GGCAGGTTTG GCAAGCCGAG GTGGTCGGTA CCGGCGCCAC TCGGGAGCAG
GAAAAGCTGA CCGCCACCGC CCAGGCGTTG GGCCTCAGTG ACCGCGCGGC GCTGCTGCAG
CGGCAGATCG CCCTCATCCA TCAGCAAATG ACCCAGCGCC TTGCCCATTA TGCGGCACTA
CAGGCCTGGG CCCAGTTGGA AACCGCATTG GGAGGCGGCT ATGATCAGTC CCGACAGCAC
CCCTGA
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| Protein sequence | MHRKRWIAAC AALGVVALGG CAPTIRAPNP ADVKAPAWAM SVQRMDGAQA LPTGAWPQQD
WWTGLASAGL DQVMTRALSP ANPRLAEAVD TVQWAASVST WRAAALGPQL SGQAAITPLQ
FSGNSPLGAL GLGNKLYDSG DIGLGFTQAL DFWGKYADRL KAALGEQRAA EARLADTRRL
LAAAVVNAYL RWAEAEQQLA STRRLQHLYQ QRQALIRTRR YLGLGTDLSI ASLSLQIQQN
TARLARWQQR AAAARFAVAE LAAIAPDALP PRPVAPASAV IPTLPPHLSL DLLAHRPDVQ
AARALARASV QQTKAARAAF YPDISFSALL DMNSAHLATL LNPASFAYSF GPALRLPIFT
SGALTGRFRG AEAQQAKAVA VYQESILQSV RQVLTALSGY QHGRQVWQAE VVGTGATREQ
EKLTATAQAL GLSDRAALLQ RQIALIHQQM TQRLAHYAAL QAWAQLETAL GGGYDQSRQH
P
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