Gene Lferr_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0038 
Symbol 
ID6875987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp41931 
End bp42833 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content63% 
IMG OID642787917 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002218507 
Protein GI198282186 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.744574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCTGC GTCATCTGCG CCATTTTGTC GTGCTCGCCG AGGCCCTGAA CTTTCATCGG 
GCGGCGACTC GCCTGCATCT CGCCCAGCCC TCCCTGAGCC GCAGCATCCG CGCTCTGGAA
GAGGAGATCG GTCTGCCGCT TTTTTTGCGC AACCAGCGGG AAGTCTCCCT CACGGCCGCC
GGTCGGGTGC TCCTGCCCGA AGCCCGACAA TTGCTGGCGC AGGCGCGGCG CACGGAGGCT
CTGCTCGGCG ATCTGCAAAA CGGGCAGGCC GGCACCCTGC GGATCGGCTT TCTTGCCTCC
ACCGCCATCG CCCTTCTGCC TGGGCTGTTG CGCGGTTTTC GTCAGCACTT TTCGCAGGTG
CATCTGGAGT TGCGGGAGAT GAGCAGCGAT GCGCAGTTGC AGGCCCTGCG CGATGACCAG
ATCGATATCG GCTTCATCCG CGATATCGGC ATCCTGCCGG ATATCCACCA GCATCTGCTG
CAACGGGAGG CGCTGATGCT GGTGCTCCCG GAGGATCATC CCTTCGCCGC AGAGAGCGCC
ATAGCCCTCC ATCGCCTGCA CCATGAGTCG TTGATTCTCC TGCGCCGCGA GGTGGCACCA
GCGTCCTATG ACCGCATCCT TGCCCAATGC CACATCCATG CCCTGAAGCC ACATATCCTG
ATGGAACTCG CCGATTCCAA TGCCGTGTTC AGCGCGGTCT TGGCGGGCCT CGGACTGGGT
TTCCTGTTCT CGGCCTTTGC GGAAATTCAA CGTCCGGGAA TCGTCTTCCG ACCGCTGGCG
GATGTCCTGG GAGACAGTGA GGTAAGTCTC GCCTGGCGCG GACGACAGGA GGACGGAAAT
CCGGCAGCGC GAACTTTTGT AACCATGGTG CAGCAGCGAT ATGCGCTGCA GGCCCAGCCC
TGA
 
Protein sequence
MDLRHLRHFV VLAEALNFHR AATRLHLAQP SLSRSIRALE EEIGLPLFLR NQREVSLTAA 
GRVLLPEARQ LLAQARRTEA LLGDLQNGQA GTLRIGFLAS TAIALLPGLL RGFRQHFSQV
HLELREMSSD AQLQALRDDQ IDIGFIRDIG ILPDIHQHLL QREALMLVLP EDHPFAAESA
IALHRLHHES LILLRREVAP ASYDRILAQC HIHALKPHIL MELADSNAVF SAVLAGLGLG
FLFSAFAEIQ RPGIVFRPLA DVLGDSEVSL AWRGRQEDGN PAARTFVTMV QQRYALQAQP