| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0032 |
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| Symbol | |
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| ID | 6875981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 36399 |
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| End bp | 37754 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642787911 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_002218501 |
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| Protein GI | 198282180 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.189606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTATC AGCAGGGAGA CACTATCGTG GCGATTGCCA CGCCGCCGGG AGAAGGCGGT
GTCGGCATTT TGCGCTTCTC CGGACCACAG GCGCCGTCCA TCGCGACGGC GCTCTGCGGC
CGGCGGTCCG CCAAACCGCT GACACCCCGT CATGCTCATT TTCGCCGCTT TTACGCCCGC
GACGGCAGCC TGATCGATCA CGGCATTGTC CTCTATTTTC CAGCCCCGAA CAGCTACACC
GGCGAAACCG TCGTGGAATT GCAGGGCCAT GGCAGCCCGC TGGCCCTCGC CAGCCTGCTC
ACCGAGGCTA TCGCCCTTGG CGCACGGGCG GCGCGTGCCG GGGAGTTCAG CGAACGGGCC
TTTCTCAATG GCCGGCTTGA TCTTGCCCAG GCCGAAGCGG TGGCCGACCT CATCCACGCC
CGCAGCGATG CTCAGGCACG AGCCGCGGCA GCGAGTCTGG AGGGCGCCTT TTCACAAGCC
GTCGATGACA TTCACGGCCA GCTCCTGCGC CTTCTCGCTC TCGCCGAAGC CGGACTGGAC
TTCAGTGAAG AAGACCTTGG CGATGCCCAT GCGCAGGCCA TCAGCGACAG CCTGGTACGG
CTGGATGCTC AGGTCGCCCA TCTGCTCAAG CAGGCACAGC AAGGCGCCCG ACTCGCCCGC
GGCGGTCGCG TGGTGCTCGC CGGACGACCC AACGTCGGCA AGTCCAGCCT GATGAACGCC
CTCGCCCGGC GCGAGTCAGC CATTGTCACC GCCATCCCCG GCACCACCCG CGACCTGCTC
CGAGAGGAGA TCATCCTCGG CGGACTGCCG GTGGAACTCG TCGACACCGC GGGACTGCGC
GAGGCGACGG ACGCCGTGGA GGCGGAGGGC GTCGCCCGCG CCCGCAACAT ATTGCACAGC
GCACAACTGA TCCTGCTGGT GGCTGATGCG AGCACGGGAT GGCAATCGGA GGACGAAGTC
ATCCTGCGCG ACCTACCGGA AGGACCGCGC CGCATCATCT GGAACAAAAT GGATCTGGTT
TCCGCACCAC CCGCCACCCC GACGGGTGAG GAAGCCATAA CACTCTCCGC CCAAACCGGC
GCAGGTCTCG ATACATTACA CTGCAGCCTG ATTGAAGCAC TGGGGGTGCA GGGCGACAGT
TGCCCCTTCA GCGCGCGCCG TCGCCATGTC GAAGCCCTGG AAAGCTGTGC GCACCGGCTC
GGCATCGCAG GTGACACGCT CCGCCTGGGA GATGCCCCGG AACTGGTCGC CCAGTCCCTG
CGTGAAGCCG CGGCAGCGTT GGCCGGCATC ACCGGCCACA TGGACGTGGA AGACATTCTC
GGCGAGATTT TTTCGCGCTT TTGCATCGGG AAATAA
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| Protein sequence | MDYQQGDTIV AIATPPGEGG VGILRFSGPQ APSIATALCG RRSAKPLTPR HAHFRRFYAR
DGSLIDHGIV LYFPAPNSYT GETVVELQGH GSPLALASLL TEAIALGARA ARAGEFSERA
FLNGRLDLAQ AEAVADLIHA RSDAQARAAA ASLEGAFSQA VDDIHGQLLR LLALAEAGLD
FSEEDLGDAH AQAISDSLVR LDAQVAHLLK QAQQGARLAR GGRVVLAGRP NVGKSSLMNA
LARRESAIVT AIPGTTRDLL REEIILGGLP VELVDTAGLR EATDAVEAEG VARARNILHS
AQLILLVADA STGWQSEDEV ILRDLPEGPR RIIWNKMDLV SAPPATPTGE EAITLSAQTG
AGLDTLHCSL IEALGVQGDS CPFSARRRHV EALESCAHRL GIAGDTLRLG DAPELVAQSL
REAAAALAGI TGHMDVEDIL GEIFSRFCIG K
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