Gene Lferr_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0023 
Symbol 
ID6875972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp25389 
End bp25988 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content62% 
IMG OID642787902 
Producthypothetical protein 
Protein accessionYP_002218492 
Protein GI198282171 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.214769 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGA GCAGCGCGTT GGGCTTGTCG GTCGGCAGAA GCAGGCAGCG GCTGTTGGTC 
GTCATACTGC TCGGGCTGGG CGGTATTTTT TGCGCAACCG GGGCGGCAGT GGCTGGTCCG
GCGTTTCACG TGGAACGTGT GCGGGTAATC CCCCATGCGA ATGCTGTTGA AATCGATGCC
AGCGTGCAGT TGGGCAAGGA AGCGCTCCTG CAGCAGGTGC TCGACCAGGG GCAGACGCTG
ACTTGGGTTG TGGAGGCGGA GTGGCGGGAA CCCGAGCCCT TCTCCTTCAT TCCCGGTATC
GGCGTTCATG CACGCCGGGA ACAGCGCTGG CACATCCGTT ATTATCCTTT GACAAACCAA
TATGCCATTG AGGATCAGCA GGGCGTGCTC ACCTTGTACG CGCAGTGGAG TGAGGTCGTC
ACGGCGCTGA GCCGGGTGCG GAACTTCGTG CTCCCGCTGG CTCACGGCGC CGCGCGGGGT
GAGGTGGCGT TGCGGGTGTA TGTCGATAGT CAGGCCTTAC CTTTGCCGTT GCGTTTGCGA
TCTTTGCTGG ACCACTGGAA ACTGGAGTCC CCATGGACCG TCGTACCCCT TCCCCGTTGA
 
Protein sequence
MRLSSALGLS VGRSRQRLLV VILLGLGGIF CATGAAVAGP AFHVERVRVI PHANAVEIDA 
SVQLGKEALL QQVLDQGQTL TWVVEAEWRE PEPFSFIPGI GVHARREQRW HIRYYPLTNQ
YAIEDQQGVL TLYAQWSEVV TALSRVRNFV LPLAHGAARG EVALRVYVDS QALPLPLRLR
SLLDHWKLES PWTVVPLPR