Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0009 |
Symbol | |
ID | 6875958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 13869 |
End bp | 14333 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642787888 |
Product | Spore coat U domain protein |
Protein accession | YP_002218478 |
Protein GI | 198282157 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.164066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00841458 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACGGA AGCTCGCTTT AGCCGCACTG CTGATTTTTG CGCCGACGGC GGTCGATGCG GCCTGCAGCG TTACCGCCAC CGGCGTTGCG TTCGGAACCT ATGTGCCGTC CGCCGCCTCG AATTCCACCG GCACAGTGAC GGTCAGTTGT AGCGCTACCC TTGGGCTGTT GTTCAATTGG ACGATCGCGC TCAATGCGGG TGTCAACAGC GGTGGCAGCT TTTCCAACCG ACGGATGGCC TCCGGAAACT CCTATTTATC CTACCAACTC TATACCGATT CCGGGCATAC TACGGTATGG GGCGACGGTA CAAGCGGCAC CGCGACGGTC AGTGGTAATT GTCTAATTAG TTTCCTGGGC ATACCCTGCT CTGGCAGCGC CACCGTCTAC GGCCAGATTC CTGCCCTGCA AAATCCAAGC CCCGGCGCCT ACACCGACAC CATTACGGTA ACGGTCACGT ACTGA
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Protein sequence | MKRKLALAAL LIFAPTAVDA ACSVTATGVA FGTYVPSAAS NSTGTVTVSC SATLGLLFNW TIALNAGVNS GGSFSNRRMA SGNSYLSYQL YTDSGHTTVW GDGTSGTATV SGNCLISFLG IPCSGSATVY GQIPALQNPS PGAYTDTITV TVTY
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