| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4984 |
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| Symbol | deoB |
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| ID | 6872223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 4813236 |
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| End bp | 4814459 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642787854 |
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| Product | phosphopentomutase |
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| Protein accession | YP_002218444 |
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| Protein GI | 198241842 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1015] Phosphopentomutase |
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| TIGRFAM ID | [TIGR01696] phosphopentomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 100 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTG CATTTATTAT GGTGCTGGAC TCATTCGGCA TCGGCGCTAC TGAAGACGCG
GATCGTTTTG GCGACGTAGG TTCCGACACT CTGGGCCACA TCGCAGAAGC TTGCGCCAAA
GGCGAAGCTG ACAATGGCCG TAAAGGCCCG TTGAATCTGC CTAACCTGAC TCGTCTGGGG
CTGGTGAAAG CGCATGAAGG CTCTACCGGT AAAATTGCCG CCGGCATGGA CGGCAACGCG
GACGTTATTG GCGCATACGC ATGGGCGCAC GAACTGTCCT CCGGCAAAGA TACGCCGTCA
GGCCACTGGG AAATCGCCGG TGTGCCGGTA CTGTTCGACT GGGGCTATTT CAGCGACCAC
GAAAACAGCT TCCCGCAGGA ACTGCTGGAT AAGCTGGTGA AACGCGCCAA CCTGCCGGGC
TATCTCGGTA ACTGCCACTC TTCCGGCACC GTTATTCTGG ACCAGCTCGG CGAAGAGCAC
ATGAAAACCG GCAAGCCGAT TTTCTACACC TCCGCTGACT CCGTGTTCCA GATTGCCTGC
CACGAAGAGA CCTTTGGCCT GGATAAACTC TACGAGCTGT GCGAAATCGC CCGTGAAGAG
CTGACCGTAG GCGGCTATAA CATTGGCCGC GTGATCGCGC GTCCGTTTAT CGGCGACAAG
GCCGGTAACT TCCAGCGTAC CGGTAACCGT CACGACCTGG CCGTTGAACC GCCAGCGCCG
ACCGTGCTGC AGAAACTGGT CGATGAAAAA CAGGGCCACG TGGTGTCCGT CGGTAAGATT
GCCGACATCT ACGCCAACTG CGGCATCACT AAGAAAGTGA AAGCGACCGG TCTGGACGCG
CTGTTCGACG CGACCCTCAA AGAGATGAAA GAAGCGGGCG ATAAAACCAT CGTTTTCACT
AACTTCGTTG ACTTCGACTC TTCCTGGGGC CACCGTCGCG ACATCGCGGG CTACGCCGCA
GGTCTGGAGC TGTTTGACCG CCGTCTGCCG GAGCTGATGG AGCTGGTGGG TGAAGATGAC
ATTCTGATCC TGACCGCTGA CCACGGCTGT GACCCGAGCT GGACCGGTAC TGACCATACC
CGTGAGCACA TTCCGGTGCT GATCTACGGT CCGAAAGTCA AACCGGGCTC TTTAGGTCAC
CGTGAAACCT TCGCGGATAT CGGCCAGACG CTGGCGACCT ACTTTGGCAC ATCGCCGATG
GACTACGGTA AAAACATGCT GTGA
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| Protein sequence | MKRAFIMVLD SFGIGATEDA DRFGDVGSDT LGHIAEACAK GEADNGRKGP LNLPNLTRLG
LVKAHEGSTG KIAAGMDGNA DVIGAYAWAH ELSSGKDTPS GHWEIAGVPV LFDWGYFSDH
ENSFPQELLD KLVKRANLPG YLGNCHSSGT VILDQLGEEH MKTGKPIFYT SADSVFQIAC
HEETFGLDKL YELCEIAREE LTVGGYNIGR VIARPFIGDK AGNFQRTGNR HDLAVEPPAP
TVLQKLVDEK QGHVVSVGKI ADIYANCGIT KKVKATGLDA LFDATLKEMK EAGDKTIVFT
NFVDFDSSWG HRRDIAGYAA GLELFDRRLP ELMELVGEDD ILILTADHGC DPSWTGTDHT
REHIPVLIYG PKVKPGSLGH RETFADIGQT LATYFGTSPM DYGKNML
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