| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4983 |
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| Symbol | deoA |
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| ID | 6872012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 4811862 |
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| End bp | 4813184 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642787853 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_002218443 |
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| Protein GI | 198242938 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02643] thymidine phosphorylase
[TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.615857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 98 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTCTCG CACAAGAAAT TATTCGTAAA AAGCGTGATG GTCATGCGTT GAGTGACGAA
GAAATTCGTT TCTTTATTAA TGGTATTCGT GACAATACTA TCTCTGAAGG GCAGATTGCC
GCCCTGGCGA TGACCATCTT CTTCCACGAT ATGACCATGC CGGAGCGTGT TTCGCTGACC
ATGGCGATGC GGGATTCCGG TACTGTCCTT GACTGGAAAA GCCTGAATCT CAATGGCCCG
ATTGTCGATA AGCATTCGAC CGGCGGCGTA GGGGACGTGA CGTCTCTGAT GTTGGGGCCA
ATGGTAGCGG CCTGCGGCGG TTATGTGCCG ATGATCTCCG GTCGCGGTCT CGGACATACC
GGCGGTACGC TCGACAAACT GGAAGCGATC CCGGGCTTCG ACATCTTCCC GGACGACAAC
CGTTTCCGCG AAATTATTCA AGACGTGGGT GTGGCGATTA TTGGGCAAAC CAGCTCGCTT
GCACCGGCGG ACAAACGTTT TTACGCCACC CGCGATATTA CCGCGACGGT GGACTCTATT
CCGCTGATCA CTGGTTCCAT CCTCGCCAAG AAACTGGCCG AAGGGCTGGA TGCGCTGGTA
ATGGACGTCA AAGTCGGCAG TGGCGCGTTT ATGCCAACCT ATGAACTTTC TGAAGCCCTT
GCTGAAGCGA TTGTTGGCGT GGCAAACGGC GCGGGAGTTC GCACTACGGC TTTGTTAACC
GATATGAACC AGGTGCTGGC TTCGAGCGCC GGTAACGCGG TGGAAGTGCG TGAAGCCGTG
CAGTTCCTGA CCGGAGAATA CCGCAATCCG CGCTTGTTTG ACGTTACCAT GGCGCTATGC
GTGGAGATGC TGATCTCCGG CCAGCTGGCG AAAGACGACG CCGAAGCGCG TGCGAAATTA
CAGGCGGTGC TGGATAACGG TAAAGCGGCA GAAGTCTTTG GTCGTATGGT GGCCGCGCAG
AAAGGGCCAA GCGATTTCGT TGAGAACTAC GATAAATACT TGCCGACCGC CATGTTGAGC
AAAGCGGTAT ATGCTGATAC CGAAGGGTTT ATCAGCGCAA TGGATACGCG TGCGCTGGGG
ATGGCGGTCG TCTCGATGGG CGGCGGCCGT CGTCAGGCGT CAGATACCAT TGATTACAGC
GTTGGCTTTA CCGACATGGC CCGTCTGGGC GACAGCATCG ACGGGCAGCG CCCGCTGGCG
GTGATTCATG CCAAAGACGA AGCCAGTTGG CAGGAAGCGG CGAAGGCCGT CAAAGCGGCA
ATTATCCTTG ACGATAAAGC GCCAGCAAGC ACACCTTCGG TCTATCGTCG AATTACTGAA
TAG
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| Protein sequence | MFLAQEIIRK KRDGHALSDE EIRFFINGIR DNTISEGQIA ALAMTIFFHD MTMPERVSLT
MAMRDSGTVL DWKSLNLNGP IVDKHSTGGV GDVTSLMLGP MVAACGGYVP MISGRGLGHT
GGTLDKLEAI PGFDIFPDDN RFREIIQDVG VAIIGQTSSL APADKRFYAT RDITATVDSI
PLITGSILAK KLAEGLDALV MDVKVGSGAF MPTYELSEAL AEAIVGVANG AGVRTTALLT
DMNQVLASSA GNAVEVREAV QFLTGEYRNP RLFDVTMALC VEMLISGQLA KDDAEARAKL
QAVLDNGKAA EVFGRMVAAQ KGPSDFVENY DKYLPTAMLS KAVYADTEGF ISAMDTRALG
MAVVSMGGGR RQASDTIDYS VGFTDMARLG DSIDGQRPLA VIHAKDEASW QEAAKAVKAA
IILDDKAPAS TPSVYRRITE
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