Gene SeD_A4962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4962 
Symbol 
ID6870994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4796323 
End bp4796997 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content49% 
IMG OID642787832 
ProductDNA-binding transcriptional activator BglJ 
Protein accessionYP_002218425 
Protein GI198242398 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.793457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA GAATCAGCAA GAGAAATGTT GCGCTCGTAG AAAAATGCGT GATGAGCACC 
ATTGGTATTA AAGGGCTATT TGATGCAATG CCGGATTGCC GACATACGCT TCATATTTTT
TCAAAACCAT CCACGTTTTA TAAGGCTGCG CTAAAGACGC CGTTTTCTGC CGTTATTTTT
TCTCTTTCTG CGTTAAGAAC TGAACGCCGG ACAGGATTAT CCAGTCTGAC GGAACTGGCG
ATAAATTATC CCCATATGCG GCGTCTGGTG ATTGCCGATG ATGATGCTGA AGCCCGCTTA
ATCAGCGCGC TATCCCCGCT GCCGCTGGAT GGGGTCATCA GCAAAGCGTC GCCGTTGGAT
GTTTTACAGG ATGCCTTATT TACATCGCTT AATAGCGCCC GGCGGACAAC GGAGCGTACA
GACAATCTTT GGGAACTTCA CCAGAATTGT ATGCTTAGTC CAACCGAGCG GGAGATTCTG
CGTTTCATGT CGAACGGCTA CTCAATGCCG CAAATTGCCG TCCAGTTAGA ACGTAACATT
AAGACTATCC GGGCGCATAA GTTTAATGTG ATGTCCAAGC TGGGCGTGAG TTCTGATGCC
GGGTTACTCG ATGCGGCGGA TATTCTGTTA TATCTGCGCG CCGGAGATGC TACCGCGCTC
CAGCATCGGG TATAG
 
Protein sequence
MENRISKRNV ALVEKCVMST IGIKGLFDAM PDCRHTLHIF SKPSTFYKAA LKTPFSAVIF 
SLSALRTERR TGLSSLTELA INYPHMRRLV IADDDAEARL ISALSPLPLD GVISKASPLD
VLQDALFTSL NSARRTTERT DNLWELHQNC MLSPTEREIL RFMSNGYSMP QIAVQLERNI
KTIRAHKFNV MSKLGVSSDA GLLDAADILL YLRAGDATAL QHRV