Gene SeD_A4960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4960 
Symbol 
ID6873451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4794148 
End bp4795092 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content52% 
IMG OID642787830 
Producthypothetical protein 
Protein accessionYP_002218423 
Protein GI198242132 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGAAGC GCACGTCTCA AGAAGCTTAT GCGTTGCGTC TGGCGGCTGA CGTTTTTATC 
AACAAGAAAT TGATCTTAAC CAACGCCATC ATGCCTGCGC TTCGTGTTAA AAAGGAAGCC 
TCTGTCATAG TGGCGGCGCA TAGAATGTCT TTTTGGACAG GACGAGTCAT GCAAGAAGAG 
CAATCAATTC AACGAGCAGT AACACGGTTA TGTATTCAAT GCGGGCTGTT TTTATTGCAG 
CACGGGGCGG AAAGCGCACT GGTTGATGAG CTTTCCACCC GCCTCGGTTT GGCGCTCGGT 
ATGGATAGCG TCGAAAGCGC GATCTCCTCT AACGCCATTG TCCTGACGAC CATTAAAGAC 
GGACAATGTC TGACATCGAC ACGTAAAAAC CAGGATCGCG GCATTAATAT GCACGTCGTC 
ACGGAGGTTC AGCATATCGT TATCCTCGCG GAACATCGTC TGCTGGATTA CAAAGGCGTG 
GAAAAACGCT TTAGCCAGCT CCGCCCGCTG CGTTATCCGC GCTGGCTGGT GGCGTTTATG 
GTCGGTCTTT CCTGCTCCTG CTTTTGTAAG CTGAATAATG GCGGCTGGGA TGGCGCGGTT 
ATCACCTTTT TCGCCAGTAT GATAGCCATG TATATCCGTC AGATGCTGGC GCAGCGGCAT 
TTACATCCGC AGATCAATTT TTGCATTACC GCCTTTGTCG CTACCACGAT TTCCGGGCTG 
ATGCTCACTC TTCCCGCCTT TAGCCAGACG CCCACTATCG CCATGGCGGC AAGCGTACTG 
CTACTGGTGC CGGGCTTTCC GCTGATTAAT TCCGTCGCAG ATATGTTTAA AGGACATATT 
AATACCGGGC TGGCGCGCTG GGCTATCGCC AGCCTGTTGA CACTAGCCAC CTGTGTGGGC 
GTAGTGATGT CAATGACAGT ATGGGGGCTA CGAGGATGGG TATAA
 
Protein sequence
MTKRTSQEAY ALRLAADVFI NKKLILTNAI MPALRVKKEA SVIVAAHRMS FWTGRVMQEE 
QSIQRAVTRL CIQCGLFLLQ HGAESALVDE LSTRLGLALG MDSVESAISS NAIVLTTIKD 
GQCLTSTRKN QDRGINMHVV TEVQHIVILA EHRLLDYKGV EKRFSQLRPL RYPRWLVAFM 
VGLSCSCFCK LNNGGWDGAV ITFFASMIAM YIRQMLAQRH LHPQINFCIT AFVATTISGL 
MLTLPAFSQT PTIAMAASVL LLVPGFPLIN SVADMFKGHI NTGLARWAIA SLLTLATCVG 
VVMSMTVWGL RGWV