Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4832 |
Symbol | nrdD |
ID | 6872907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 4684998 |
End bp | 4687136 |
Gene Length | 2139 bp |
Protein Length | 712 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642787721 |
Product | anaerobic ribonucleoside triphosphate reductase |
Protein accession | YP_002218315 |
Protein GI | 198244214 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCGC ATGTGATGAA ACGAGATGGC TGTAAAGTGC CATTCAAATC AGAGCGCATT AAGGAAGCCA TTCTACGTGC AGCTAAAGCA GCGGGAGTCG ATGACGCAGA TTACTGTGCC ACCGTCGCAG AAGTCGTTAG CAGCCAAATG AACGCACGCA GTCAGGTGGA TATTAACGAG ATCCAAACTG CGGTTGAAAA CCAACTGATG TCCGGCCCGT ACAAACAGCT TGCCCGCGCC TACATCGAAT ACCGTCACGA TCGCGACATT CAGCGTGAAA AGCGTGGTCG TCTGAACCAG GAAATTCGCG GCCTGGTAGA GCAAACCAAC TCCGCGTTGC TCAATGAAAA CGCCAACAAA GACAGTAAAG TCATTCCCAC CCAGCGCGAT TTGCTGGCCG GGATTGTCGC CAAACACTAT GCCCGCCAGC ACCTGTTGCC GCGTGACGTA GTACAAGCGC ATGAGCGCGG CGATATCCAC TATCACGATC TCGACTATTC GCCGTTCTTC CCGATGTTCA ACTGTATGTT GATCGACCTG AAAGGCATGT TGACCCAGGG CTTTAAGATG GGTAACGCCG AGATCGAACC GCCAAAATCT ATCTCTACCG CCACTGCCGT TACCGCGCAG ATTATCGCGC AGGTCGCCAG CCATATTTAT GGCGGCACCA CCATTAACCG TATCGACGAA GTGTTGGCGC CGTTTGTCAC CGAAAGCTAT AACAAGCACC GCAAAACCGC CGATGAGTGG CAGATCCCGG ATGCCGAAGG GTATGCGCGT TCTCGCACCG AAAAAGAGTG CTACGACGCC TTCCAGTCGC TGGAATACGA AGTTAACACG CTGCACACCG CTAACGGCCA GACGCCTTTC GTGACCTTTG GTTTTGGCCT CGGCACCAGT TGGGAGTCGC GTCTGATCCA GGCGTCTATT TTGCGTAACC GTATCGCCGG TCTGGGTAAA AATCGCAAAA CCGCCGTGTT CCCGAAACTG GTCTTCGCTA TCCGCGACGG TTTGAACCAC AAGTTTGGCG ATCCGAACTA CGACATTAAA CAACTGGCGC TGGAGTGCGC GAGCAAGCGC ATGTATCCGG ACATTCTCAA CTACGATCAG GTGGTCAAAG TCACCGGTTC GTTCAAAACG CCAATGGGCT GCCGCAGCTT CCTCGGCGTG TGGGAGAACG AAAACGGCGA GCAGATCCAC GACGGGCGTA ACAACCTGGG CGTGATTAGC CTTAACCTGC CGCGCATCGC GCTGGAAGCA AAAGGCGACG AAACCGCATT CTGGAAACTG CTGGATGAAC GTCTGGCGCT GGCGCGGAAG GCGCTGATGA CCCGTATCGC CCGCCTTGAA GGCGTGAAAG CCCGCGTCGC GCCTATCCTG TATATGGAAG GCGCCTGCGG CGTGCGGCTG AAAGCGGACG ACGACGTGTC TGAAATATTT AAAAATGGTC GTGCGTCCAT CTCTCTGGGC TACATTGGTA TCCATGAAAC CATTAACGCG CTGTTTGGCG GCGAACACCT GTACGACAGC GAGCAACTTC GCGCTAAAGG CATCGCGATT GTGGAGCGTC TGCGCCAGGC CGTGGATCAG TGGAAAGACG AGACCGGCTA CGGCTTTAGT CTGTACAGCA CGCCAAGTGA AAACCTCTGT GACCGCTTCT GCCGTCTGGA TACCGCCGAG TTCGGCGTGG TGCCGGGCGT AACCGATAAA GGTTACTACA CCAACAGCTT CCACCTCGAC GTGGAGAAGA AGGTCAACCC GTACGACAAA ATCGATTTCG AAGCGCCGTA TCCGCCGCTG GCGAACGGGG GTTTCATTTG CTACGGCGAA TACCCGAACA TTCAGCACAA CCTGAAAGCG CTGGAAGATG TCTGGGATTA CAGCTATCAG CATGTACCGT ATTACGGCAC CAACACGCCG ATCGATGAAT GCTACGAGTG CGGCTTTACC GGCGAGTTCG AATGTACCAG TAAAGGTTTT ACCTGCCCGA AATGCGGCAA CCACGACGCC GCGCGCGTCT CGGTCACCCG CCGCGTGTGC GGTTATTTAG GCAGCCCGGA CGCGCGTCCG TTTAACGCAG GCAAGCAGGA AGAAGTGAAG CGCCGCGTGA AGCATTTAGG CAACGGGCAG ATAGGTTAA
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Protein sequence | MTPHVMKRDG CKVPFKSERI KEAILRAAKA AGVDDADYCA TVAEVVSSQM NARSQVDINE IQTAVENQLM SGPYKQLARA YIEYRHDRDI QREKRGRLNQ EIRGLVEQTN SALLNENANK DSKVIPTQRD LLAGIVAKHY ARQHLLPRDV VQAHERGDIH YHDLDYSPFF PMFNCMLIDL KGMLTQGFKM GNAEIEPPKS ISTATAVTAQ IIAQVASHIY GGTTINRIDE VLAPFVTESY NKHRKTADEW QIPDAEGYAR SRTEKECYDA FQSLEYEVNT LHTANGQTPF VTFGFGLGTS WESRLIQASI LRNRIAGLGK NRKTAVFPKL VFAIRDGLNH KFGDPNYDIK QLALECASKR MYPDILNYDQ VVKVTGSFKT PMGCRSFLGV WENENGEQIH DGRNNLGVIS LNLPRIALEA KGDETAFWKL LDERLALARK ALMTRIARLE GVKARVAPIL YMEGACGVRL KADDDVSEIF KNGRASISLG YIGIHETINA LFGGEHLYDS EQLRAKGIAI VERLRQAVDQ WKDETGYGFS LYSTPSENLC DRFCRLDTAE FGVVPGVTDK GYYTNSFHLD VEKKVNPYDK IDFEAPYPPL ANGGFICYGE YPNIQHNLKA LEDVWDYSYQ HVPYYGTNTP IDECYECGFT GEFECTSKGF TCPKCGNHDA ARVSVTRRVC GYLGSPDARP FNAGKQEEVK RRVKHLGNGQ IG
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