Gene SeD_A4766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4766 
Symbol 
ID6873045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4626108 
End bp4626839 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content57% 
IMG OID642787659 
Product23S rRNA (guanosine-2'-O-)-methyltransferase 
Protein accessionYP_002218253 
Protein GI198243348 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAA TGATTTACGG CATCCACGCA GTGCAGGCCC TGCTGGAGCG CGCCCCTGAA 
CGTTTTCAGG AAGTCTTTAT TTTAAAAGGC CGTGAAGATA AACGTCTGTT GCCGCTGATT
CACGCCCTTG AGTCCCAGGG CGTTGTTATC CAGCTGGCAA ACCGCCAATA TCTCGACGAG
AAAAGCGACG GTGCCGTGCA TCAGGGTATT ATCGCTCGCG TGAAACCAGG CCGGCAGTAT
CAGGAAAACG ATCTGCCGGA TCTGATCGCA TTACACGAAC GCCCCTTTTT GTTGATCCTC
GATGGCGTCA CCGATCCGCA TAATCTTGGC GCCTGTCTGC GCAGCGCCGA TGCCGCTGGC
GTACATGCGG TAATCGTGCC GAAAGACCGC TCCGCGCAAC TTAACGCGAC GGCGAAGAAA
GTCGCCTGCG GCGCAGCGGA AAGCGTGCCG TTGATCCGCG TCACCAACCT GGCGCGCACG
ATGCGCATGT TGCAGGAAGA GAATATCTGG ATTGTCGGGA CGGCGGGCGA GGCTGACCAT
ACGCTGTATC AGAGCAAAAT GCCTGGCCGC ATGGCGCTGG TCATGGGCGC AGAAGGTGAA
GGTATGCGTC GTCTGACCCG TGAGCACTGC GATGAGCTGA TCAGCATTCC TATGGCTGGT
AGCGTGTCGT CGCTGAATGT CTCTGTGGCG ACCGGGATTT GTCTGTTTGA AGCCGTTCGC
CAGCGAACCT GA
 
Protein sequence
MSEMIYGIHA VQALLERAPE RFQEVFILKG REDKRLLPLI HALESQGVVI QLANRQYLDE 
KSDGAVHQGI IARVKPGRQY QENDLPDLIA LHERPFLLIL DGVTDPHNLG ACLRSADAAG
VHAVIVPKDR SAQLNATAKK VACGAAESVP LIRVTNLART MRMLQEENIW IVGTAGEADH
TLYQSKMPGR MALVMGAEGE GMRRLTREHC DELISIPMAG SVSSLNVSVA TGICLFEAVR
QRT