Gene SeD_A4745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4745 
Symbolpsd 
ID6871922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4605091 
End bp4606059 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content54% 
IMG OID642787638 
Productphosphatidylserine decarboxylase 
Protein accessionYP_002218235 
Protein GI198243190 
COG category[I] Lipid transport and metabolism 
COG ID[COG0688] Phosphatidylserine decarboxylase 
TIGRFAM ID[TIGR00163] phosphatidylserine decarboxylase precursor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.24348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTAAACT CATTTAAACT TTCGCTACAA TACATTCTGC CGAAACTATG GCTCACTCGC 
CTGGCGGGCT GGGGCGCAAG CAAACGAGCA GGATGGCTGA CAAAACTGGT TATCGATCTC
TTCGTAAAGT ATTACAAAGT CGATATGACC GAGGCGCAAA AACCGGATAC CGCCAGCTAT
CGTACGTTCA ATGATTTCTT TGTTCGTCCG CTGCGTGATG ACGTGCGTCC GCTCAATACC
GATCCTAACA TCCTGGTTAT GCCTGCCGAC GGCGTGATAA GCCAGTTGGG TCGTATCGAA
GAAGATAAAA TTTTGCAGGC CAAAGGCCAT AATTACAGCC TTGAAGCGTT GCTGGCGGGT
AACTACCTGA TGGCGGATAA GTTCCGCAAC GGCACGTTTG TGACCACTTA CCTCTCCCCT
CGCGACTACC ATCGCGTGCA TATGCCATGC AACGGCATCC TGCGCGAAAT GATCTACGTA
CCGGGCGATC TGTTCTCCGT TAACCATCTG ACCGCGCAAA ACGTCCCCAA CCTGTTTGCC
CGCAACGAGC GCGTTATCTG TCTGTTTGAT ACCGAGTTCG GCCCTATGGC GCAGATTCTG
GTCGGCGCAA CTATTGTCGG CAGTATCGAA ACCGTCTGGG CGGGGACCAT TACCCCGCCG
CGCGAAGGCA TCATCAAGCG CTGGACCTGG CCAGAAGGCG AACATGAAGG GTCTGTCGCC
TTGTTGAAAG GCCAGGAGAT GGGGCGCTTT AAACTGGGTT CCACGGTTAT CAACTTATTT
GCGCCGGGGA AAGTGAATCT GATCGCGTCG CTGGCAAGCC TGTCCGTTAC CAAAATTGGC
CAACCGCTGG CGACGTCGAC CGAAACATTC GTCGCGCCGG AGGTAGAACC TGCTCCGCTG
CCGGCAGAAG AAATTAAAGC CGAACACGAC GCCAGCCCGC TGGTTGACAA TAAAAAAGAC
GACACCTAA
 
Protein sequence
MLNSFKLSLQ YILPKLWLTR LAGWGASKRA GWLTKLVIDL FVKYYKVDMT EAQKPDTASY 
RTFNDFFVRP LRDDVRPLNT DPNILVMPAD GVISQLGRIE EDKILQAKGH NYSLEALLAG
NYLMADKFRN GTFVTTYLSP RDYHRVHMPC NGILREMIYV PGDLFSVNHL TAQNVPNLFA
RNERVICLFD TEFGPMAQIL VGATIVGSIE TVWAGTITPP REGIIKRWTW PEGEHEGSVA
LLKGQEMGRF KLGSTVINLF APGKVNLIAS LASLSVTKIG QPLATSTETF VAPEVEPAPL
PAEEIKAEHD ASPLVDNKKD DT