Gene SeD_A4742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4742 
Symbol 
ID6871553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4599832 
End bp4601313 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content49% 
IMG OID642787635 
Productinner membrane transporter YjeM 
Protein accessionYP_002218232 
Protein GI198245631 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTA TTGGGCTTAT CCTGATGATT TTTACTTCTG TTTTTGGTTT TGCGAATAGC 
CCGTCGGCGT TTTATTTAAT GGGGTATAGC GCAATCCCGT GGTATATATT TTCTGCCTTG
CTGTTTTTTA TTCCATTCGC CTTAATGATG GCTGAAATGG GTTCCGCTTA TCGCAAAGAA
GAGGGCGGGA TCTATTCGTG GATGAATAAT AGCGTGGGGC CACGTTACGC GTTTATTGGC
ACGTTTATGT GGTTTTCATC GTATGTCATA TGGATGGTAA GTACGGCGGC AAAAATTTGG
GTACCGTTTT CTACTTTTGT TTTTGGCGCC GATATGACGC AGCACTGGCG TATTGCAGGG
CTTGAGCCTA CGCAGGTTGT CGGGCTGCTC GCCGTCGGCT GGATGATTCT GGTGACGTGT
GTCGCCGCCA GAGGGATCAA TAAAATTGCG CGAATTACGG CGGTCGGAGG TATTGCCGTA
ATGTGTCTTA ATTTAGTTTT ATTGTTAGTG AGTGTCGCTA TTTTGTTATT AAATGGTGGG
CATTTTGCAC AAGAAATTAA TTTTACCTCG TCACCGAATC CGGGTTATCA CTCCGGCCTG
GCAATGTTGT CATTTGTGGT ATTTGCTATT TTTGCGTACG GCGGTATTGA GGCTGTCGGC
GGACTGGTGG ATAAAACCGA GAAACCGGAA AAGAATTTTG CGAAAGGTAT TGTTTTCGCG
GCTATTGTGA TTTCAATTGG TTATTCTTTG GCGATCTTTT TATGGGGCGT CAGCACTAAC
TGGCAACAGA TATTAAGTAA TAGCGCCGTT AACTTAGGGA ATATTACCTA CATTTTGATG
TCGAGTTTAG GCACGACATT AGGTAACGCG TTAAACCTTT CTCCGGACGC AGCGATGACG
GTGGGCGTCT GGTTTGCGCG TATCACCGGC CTTTCTATGT TTCTGGCTTA TACCGGCGCG
TTTTTTACGT TGAGCTATTC ACCGCTGAAA GCCATTATTC AGGGGACGCC AAAAGCGTTG
TGGCCCGCGC CGATGACGAC ACTGAACGCT AACGGTATGC CGGCGACCGC TATGTGGCTA
CAGTGCGTGC TGGTGAGTCT GTTTATTTTG CTGGTCTCTT TTGGCGGTGA CACCGCATCG
GCGTTTTATA ACAAACTCAC GCTGATGGCG AACGTCTCAA TGACCTTGCC ATACCTGTTC
CTTGCGCTGG CATTTCCCTT CTTTAAAGCG CGTCAGGATC TGGAGCGGCC ATTTGTTCTC
TTTAAAACCA AAGCCTCTAC CCTGGTCGCG ACGGGTGTTG TGGTGCTGGT GGTGACGTTT
GCCAACGTCT TTACCATCAT CCAGCCGGTG ATTGAAGCTG GGGATTGGGA CAGCGCCTTG
TGGATGATCG GTGGGCCGAT CTTCTTCTCG CTGCTGGCGA TGGCGATTTA TCAGAATTAC
AGCAGCCGCA TGAGCGCTGA TCCGGAGTGG GCGGCGGAGT AA
 
Protein sequence
MSLIGLILMI FTSVFGFANS PSAFYLMGYS AIPWYIFSAL LFFIPFALMM AEMGSAYRKE 
EGGIYSWMNN SVGPRYAFIG TFMWFSSYVI WMVSTAAKIW VPFSTFVFGA DMTQHWRIAG
LEPTQVVGLL AVGWMILVTC VAARGINKIA RITAVGGIAV MCLNLVLLLV SVAILLLNGG
HFAQEINFTS SPNPGYHSGL AMLSFVVFAI FAYGGIEAVG GLVDKTEKPE KNFAKGIVFA
AIVISIGYSL AIFLWGVSTN WQQILSNSAV NLGNITYILM SSLGTTLGNA LNLSPDAAMT
VGVWFARITG LSMFLAYTGA FFTLSYSPLK AIIQGTPKAL WPAPMTTLNA NGMPATAMWL
QCVLVSLFIL LVSFGGDTAS AFYNKLTLMA NVSMTLPYLF LALAFPFFKA RQDLERPFVL
FKTKASTLVA TGVVVLVVTF ANVFTIIQPV IEAGDWDSAL WMIGGPIFFS LLAMAIYQNY
SSRMSADPEW AAE