Gene SeD_A4673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4673 
SymbolnrfC 
ID6872726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4533669 
End bp4534340 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content57% 
IMG OID642787574 
Productcytochrome c nitrite reductase, Fe-S protein 
Protein accessionYP_002218172 
Protein GI198241756 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03149] cytochrome c nitrite reductase, Fe-S protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTGCA CCCGACGTCA ATTTATTACC CGCGTCGGCG CGCTGGCGGT GGTCAGTGGG 
ATGGCAGGAC GCGTTGTAGC GAACACGTTG AATATTAACG GCGTGCGTTA TGGCATGGTA
CACGATGAGT CATTATGCAT CGGCTGCACG GCCTGCATGG ATGCCTGTCG GGAAGTCAAC
AACGTGCCGG AAGGCGTATC GCGCCTGACG ATTATTCGCA GCGAGCCGCA GGGGACGTTT
CCTGATGTGA AATATCGCTT CTTCCGCCAC TCGTGCCAGC ATTGCGACCA TGCCCCCTGC
GTTGACGTCT GCCCGACCGG CGCATCATTC CGCGATGCCG CCAGCGGTAT TGTCGACGTG
AACCCGGACC TTTGCGTCGG CTGCCAGTAC TGCATTGCCG CGTGTCCCTA CCGCGTGCGC
TTTATCCATC CGGTCAGTAA GACGGCGGAT AAATGCGATT TCTGCCGGAA AACCAACCTG
AAAGCGGGCA AACAGCCCGC CTGCGTTGAG TCATGCCCGA CGAAGGCGCT GACGTTTGGT
AATCTGGACG ATCCCAACAG CGATATTTCC CGTTTGTTGC GGCAGAAAAC CACCTATCGT
TACAAGCTGG CGCTGGGCAC AAAACCGAAG GTCTACCGCG TTCCCTTTAA CTATGGGGAG
GTGAGCCAAT GA
 
Protein sequence
MSCTRRQFIT RVGALAVVSG MAGRVVANTL NINGVRYGMV HDESLCIGCT ACMDACREVN 
NVPEGVSRLT IIRSEPQGTF PDVKYRFFRH SCQHCDHAPC VDVCPTGASF RDAASGIVDV
NPDLCVGCQY CIAACPYRVR FIHPVSKTAD KCDFCRKTNL KAGKQPACVE SCPTKALTFG
NLDDPNSDIS RLLRQKTTYR YKLALGTKPK VYRVPFNYGE VSQ