Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4673 |
Symbol | nrfC |
ID | 6872726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4533669 |
End bp | 4534340 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642787574 |
Product | cytochrome c nitrite reductase, Fe-S protein |
Protein accession | YP_002218172 |
Protein GI | 198241756 |
COG category | [C] Energy production and conversion |
COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR03149] cytochrome c nitrite reductase, Fe-S protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTGCA CCCGACGTCA ATTTATTACC CGCGTCGGCG CGCTGGCGGT GGTCAGTGGG ATGGCAGGAC GCGTTGTAGC GAACACGTTG AATATTAACG GCGTGCGTTA TGGCATGGTA CACGATGAGT CATTATGCAT CGGCTGCACG GCCTGCATGG ATGCCTGTCG GGAAGTCAAC AACGTGCCGG AAGGCGTATC GCGCCTGACG ATTATTCGCA GCGAGCCGCA GGGGACGTTT CCTGATGTGA AATATCGCTT CTTCCGCCAC TCGTGCCAGC ATTGCGACCA TGCCCCCTGC GTTGACGTCT GCCCGACCGG CGCATCATTC CGCGATGCCG CCAGCGGTAT TGTCGACGTG AACCCGGACC TTTGCGTCGG CTGCCAGTAC TGCATTGCCG CGTGTCCCTA CCGCGTGCGC TTTATCCATC CGGTCAGTAA GACGGCGGAT AAATGCGATT TCTGCCGGAA AACCAACCTG AAAGCGGGCA AACAGCCCGC CTGCGTTGAG TCATGCCCGA CGAAGGCGCT GACGTTTGGT AATCTGGACG ATCCCAACAG CGATATTTCC CGTTTGTTGC GGCAGAAAAC CACCTATCGT TACAAGCTGG CGCTGGGCAC AAAACCGAAG GTCTACCGCG TTCCCTTTAA CTATGGGGAG GTGAGCCAAT GA
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Protein sequence | MSCTRRQFIT RVGALAVVSG MAGRVVANTL NINGVRYGMV HDESLCIGCT ACMDACREVN NVPEGVSRLT IIRSEPQGTF PDVKYRFFRH SCQHCDHAPC VDVCPTGASF RDAASGIVDV NPDLCVGCQY CIAACPYRVR FIHPVSKTAD KCDFCRKTNL KAGKQPACVE SCPTKALTFG NLDDPNSDIS RLLRQKTTYR YKLALGTKPK VYRVPFNYGE VSQ
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