Gene SeD_A4668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4668 
SymbolactP 
ID6874629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4526968 
End bp4528617 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content56% 
IMG OID642787569 
Productacetate permease 
Protein accessionYP_002218167 
Protein GI198242818 
COG category[R] General function prediction only 
COG ID[COG4147] Predicted symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family
[TIGR02711] cation/acetate symporter ActP 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.962936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGAG TTCTGACGGC GCTTGCCGCC GCACTCCCCT TCGCCGCTCA TGCGGCGGAT 
GCCATTAGCG GCGCGGTTGA ACGCCAGCCC ACCAACTGGC AGGCGATTAT CATGTTTTTG
ATTTTCGTCG TTTTTACGCT CGGTATTACC TACTGGGCCT CTAAACGCGT ACGTTCCCGT
AGCGACTACT ACACGGCTGG CGGCAATATC ACCGGGTTCC AGAACGGCCT GGCGATTGCC
GGCGACTATA TGTCCGCCGC GTCATTTCTC GGCATTTCCG CTCTGGTGTT TACCTCCGGT
TATGACGGGC TGATCTATTC GCTGGGCTTC CTTGTCGGCT GGCCAATCAT CCTGTTTTTG
ATTGCCGAGC GCCTGCGTAA TCTGGGACGT TATACTTTTG CTGACGTTGC CTCTTATCGC
CTGAAACAGG GGCCAATCCG TATTCTTTCG GCCTGTGGCT CCCTGGTAGT GGTGGCGCTT
TATCTCATCG CCCAAATGGT CGGCGCCGGT AAACTGATTG AACTGCTGTT CGGCCTCAAC
TATCACATCG CTGTGGTGCT GGTCGGCGTG CTGATGATGA TGTACGTGCT GTTCGGCGGG
ATGCTGGCGA CAACGTGGGT GCAAATTATC AAAGCCGTCC TGTTGCTGTT TGGCGCCAGT
TTTATGGCCT TTATGGTGAT GAAACACGTC GGCTTTAGCT TCAATAATCT GTTTACCGAA
GCCATGGCGG TACACCCGAA AGGCACGGCG ATTATGAGCC CAGGAGGATT GGTGCAAGAT
CCGATTTCGG CATTGTCGTT GGGTCTGGGA CTGATGTTCG GCACCGCCGG TTTGCCGCAT
ATTCTGATGC GTTTCTTTAC GGTCAGCGAT GCCCGCGAAG CGCGCAAGAG CGTGTTCTAC
GCCACCGGTT TTATGGGCTA TTTCTACATT CTGACCTTTA TTATCGGCTT CGGCGCTATC
ATGCTGGTGG GGGCGAATCC AGCCTATAAA GATGCCGCGG GCGCGCTGAT TGGCGGCAAT
AACATGGCGG CGGTGCATCT GGCCAACGCG GTAGGCGGCA ACCTGTTCCT CGGCTTTATT
TCGGCAGTGG CGTTTGCCAC CATTCTGGCG GTGGTCGCCG GTCTGACGCT GGCGGGCGCA
TCGGCGGTGT CGCATGATTT GTACGCTAAC GTGTTCCGCA AAGGCGCAAC CGAACGTGAA
GAGCTGAAGG TGTCGAAAAT CACCGTCCTG GTGCTGGGCG TGATCGCCAT TATCCTCGGC
GTCCTGTTTG AAAATCAAAA CATCGCCTTT ATGGTGGGCC TGGCGTTTGC TATCGCCGCG
AGCTGCAACT TCCCCATCAT TCTGCTTTCC ATGTACTGGT CAAAACTGAC CACGCGCGGC
GCTATGCTGG GCGGCTGGTT AGGTTTACTG ACAGCGGTGG TGCTGATGAT TCTTGGCCCT
ACCATTTGGG TGCAGATCCT CGGCCATGAA AAAGCGATCT TCCCGTATGA GTATCCGGCG
CTGTTCTCTA TCAGCGTGGC GTTCCTGGGG ATCTGGTTTT TCTCGGCCAC CGATAACTCG
GCAGAAGGCA ACCGTGAACG TGAGCAGTTC CGCGCTCAGT TTATTCGCTC CCAAACGGGA
TTCGGCGTAG AACAAGGGCG TGCGCATTAA
 
Protein sequence
MKRVLTALAA ALPFAAHAAD AISGAVERQP TNWQAIIMFL IFVVFTLGIT YWASKRVRSR 
SDYYTAGGNI TGFQNGLAIA GDYMSAASFL GISALVFTSG YDGLIYSLGF LVGWPIILFL
IAERLRNLGR YTFADVASYR LKQGPIRILS ACGSLVVVAL YLIAQMVGAG KLIELLFGLN
YHIAVVLVGV LMMMYVLFGG MLATTWVQII KAVLLLFGAS FMAFMVMKHV GFSFNNLFTE
AMAVHPKGTA IMSPGGLVQD PISALSLGLG LMFGTAGLPH ILMRFFTVSD AREARKSVFY
ATGFMGYFYI LTFIIGFGAI MLVGANPAYK DAAGALIGGN NMAAVHLANA VGGNLFLGFI
SAVAFATILA VVAGLTLAGA SAVSHDLYAN VFRKGATERE ELKVSKITVL VLGVIAIILG
VLFENQNIAF MVGLAFAIAA SCNFPIILLS MYWSKLTTRG AMLGGWLGLL TAVVLMILGP
TIWVQILGHE KAIFPYEYPA LFSISVAFLG IWFFSATDNS AEGNREREQF RAQFIRSQTG
FGVEQGRAH