Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4667 |
Symbol | |
ID | 6875282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 4526240 |
End bp | 4526929 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642787568 |
Product | LrgB family protein |
Protein accession | YP_002218166 |
Protein GI | 198245192 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1346] Putative effector of murein hydrolase |
TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.598523 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 84 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATAACG TTCAGTTAAG CGTACTGTGC CTGGTGATTA CGCTGGGAAT TTACTTCGCC AATAAGCGTC TGTATCGCCG TTTTCGCAAA TTGCCGTTGA TGCCATTAGT GTTGACGCCG GCACTGCTGG TGTTAATGCT GGTGTTCGGT CATATCTCCT GGCAAAACTA CATTGGTGAA TCGCACTGGC TATTGTGGCT GCTCGGCCCG GCGACTATTG CCTTTGCGGT GCCGGTGTAC GATAACCTCG CGATTATCAA ACGTCACTGG ATGTCGCTCA CCGCGGGCGT AGTGACGGCG ACGGTGGTGG CAGTCACCAG TTCAGTTTGG CTGGCGCGTC TGTTCACGTT ATCGGATGAG ATTCAGCGTA GTCTGGCGGT ACGTTCCGTT ACTACGCTGT TTGCGCTGGC GGCGGCAGAA CCCCTGGGCG GGCAGCCGGA TCTGGTGGCG CTGTTCGTGG TCGTCACTGG CGTGTTTGGC ATGGCGGTCG GCGACGCGCT ATTTTTGCGT CTCTCTATCC GGGAAGGCAT GGCAAAAGGG GCAGGATTCG GCGCGGCGTC ACATGGGGCG GGCACGGCGC GTTCCTATGA ACTTGGTCAG CAGGAGGGCG TCGTCGCCAG TCTGGTCATG ATGCTGTCCG GCGTGGTGAT GGTGCTGGCA GCCCCGCTGG TGGCGAGGGT GATGTTCTGA
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Protein sequence | MNNVQLSVLC LVITLGIYFA NKRLYRRFRK LPLMPLVLTP ALLVLMLVFG HISWQNYIGE SHWLLWLLGP ATIAFAVPVY DNLAIIKRHW MSLTAGVVTA TVVAVTSSVW LARLFTLSDE IQRSLAVRSV TTLFALAAAE PLGGQPDLVA LFVVVTGVFG MAVGDALFLR LSIREGMAKG AGFGAASHGA GTARSYELGQ QEGVVASLVM MLSGVVMVLA APLVARVMF
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