Gene SeD_A4665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4665 
Symbol 
ID6872359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp4525732 
End bp4526247 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content52% 
IMG OID642787567 
ProductLrgA family protein 
Protein accessionYP_002218165 
Protein GI198245809 
COG category[R] General function prediction only 
COG ID[COG1380] Putative effector of murein hydrolase LrgA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.338361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATTC CTTCCGACTA TGCCTGCAAT GATTTTAATT CATTTCTGCC CGTGACGGAG 
GTTCTCTATA CTGGCGCTCC GTATTATTTT TCAGGACATT CCCTCATGGC TGTGGCGATA 
AGCCGCGTTA CGCCTGCCGT TGTGCAACGA CTCCAGGTAC CGGTTCAGGT ACTGCTCTAT 
GCAGGTTTAT TCATTTTTTC CCAATATCTT GTCTCCTGGC TGCACCTGCC GTTGCCCGCG 
AATCTGGTCG GCATGGTGCT TATGTTGGCG CTGATCGTTT GCCGGATTAT TCCGCTTAGC 
TGGGTACGCG CAGGCGCACG CTGGCTGCTG GCGGAGATGC TGTTATTCTT TGTTCCCGCC 
GTCGTGGCGG TAGTGAACTA TGCCCATCTG TTACTGGTGG ACGGCTGGCG CATTTTCTCG 
GTGATAGCGA TCAGTACCTT AATGGTACTC GGCGCGACGG CGTGGGTGGT GGATAAAGTG 
TATCGCTATG AGATGAGCAG GCTAAACCGT GAATAA
 
Protein sequence
MIIPSDYACN DFNSFLPVTE VLYTGAPYYF SGHSLMAVAI SRVTPAVVQR LQVPVQVLLY 
AGLFIFSQYL VSWLHLPLPA NLVGMVLMLA LIVCRIIPLS WVRAGARWLL AEMLLFFVPA 
VVAVVNYAHL LLVDGWRIFS VIAISTLMVL GATAWVVDKV YRYEMSRLNR E