Gene SeD_A4615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4615 
Symbolpgi 
ID6873231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4455620 
End bp4457269 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content53% 
IMG OID642787518 
Productglucose-6-phosphate isomerase 
Protein accessionYP_002218116 
Protein GI198242122 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.267215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA TCAATCCAAC GCAGACTTCT GCCTGGCAGG CGCTCCAGAA ACACTACGAT 
GAAATGAAAG ACGTTACGAT CGCTGAGCTT TTCGCGAACG ATAGCGACCG TTTCGCTAAA
TTTTCCGCGA CGTTTGACGA TCTGATGCTG GTGGATTTCT CCAAAAACCG CATCACCGAA
GAGACGCTGG CAAAATTACA GGATCTGGCG AAAGAGACCG ATCTGGCCGG CGCGATTAAA
TCCATGTTCT CCGGCGAGAA GATCAACCGC ACCGAAGACC GCGCCGTGCT GCACGTGGCG
CTGCGTAACC GTAGCAATAC GCCGATCATT GTGGACGGCA AAGATGTGAT GCCGGAAGTG
AACGCCGTGC TTGAGAAAAT GAAAACTTTC TCGCAAGCGA TTATCTCCGG TCAGTGGAAA
GGCTACACCG GTAAGGCCAT CACCGACGTG GTGAACATCG GTATCGGCGG TTCCGACCTC
GGCCCGTTCA TGGTGACCGA AGCGCTGCGT CCGTATAAAA ATCATCTGAC TATGCACTTC
GTCTCTAACG TTGATGGCAC CCACATCGCT GAAGTGCTGA AAAAAGTGAA CCCGGAAACC
ACGCTGTTCC TGGTCGCTTC TAAAACTTTC ACCACCCAGG AAACCATGAC CAACGCCCAC
AGCGCGCGCG ACTGGTTCCT GAAAACTGCA GGCGATGAAA AACACGTGGC GAAACACTTT
GCTGCGCTCT CCACCAACGC CAAAGCGGTC GGCGAATTTG GTATCGACAC GGCCAATATG
TTCGAGTTCT GGGACTGGGT CGGCGGTCGT TACTCGCTGT GGTCTGCCAT CGGGCTGTCC
ATTATTCTGT CCGTCGGTTT CGACAACTTT GTCGAGCTGC TTTCCGGCGC GCACGCGATG
GACAAGCATT TCTCCACCAC TCCGGCGGAG AAAAACCTAC CCATTCTGCT GGCGTTGATT
GGCATCTGGT ACAACAATTT CTTCGGCGCG GAAACCGAAG CCATTCTGCC GTACGACCAG
TATATGCACC GTTTCGCCGC CTACTTCCAG CAGGGTAACA TGGAATCCAA CGGTAAATAC
GTTGACCGTA ACGGCAACGC CGTGGATTAC CAGACAGGCC CAATTATCTG GGGCGAACCA
GGCACCAACG GTCAGCACGC GTTTTATCAA TTGATTCACC AGGGTACTAA AATGGTGCCG
TGTGACTTTA TCGCCCCGGC TATCACCCAT AACCCGCTAT CCGATCATCA TCAGAAGCTG
CTGTCTAACT TCTTCGCGCA GACCGAAGCG CTGGCGTTTG GTAAATCCCG CGAGGTGGTT
GAGCAGGAAT ATCGCGATCA GGGTAAAGAT CCGGCGCAGC TTGAACACGT TGTGCCATTC
AAAGTGTTTG AAGGCAACCG CCCGACCAAC TCTATCCTGC TGCGTGAAAT TACGCCGTTC
AGCCTGGGCG CACTGATTGC GTTGTATGAG CATAAAATCT TTACACAGGG CGTCATCCTG
AACATCTTTA CTTTCGACCA GTGGGGCGTT GAGTTGGGTA AACAGTTGGC TAACCGTATT
CTGCCGGAGT TGGGCGATGA TAAAGCTATT TCGTCCCATG ATAGCTCTAC TAACGGTCTG
ATTAACCGTT ATAAAGCCTG GCGAGCCTGA
 
Protein sequence
MKNINPTQTS AWQALQKHYD EMKDVTIAEL FANDSDRFAK FSATFDDLML VDFSKNRITE 
ETLAKLQDLA KETDLAGAIK SMFSGEKINR TEDRAVLHVA LRNRSNTPII VDGKDVMPEV
NAVLEKMKTF SQAIISGQWK GYTGKAITDV VNIGIGGSDL GPFMVTEALR PYKNHLTMHF
VSNVDGTHIA EVLKKVNPET TLFLVASKTF TTQETMTNAH SARDWFLKTA GDEKHVAKHF
AALSTNAKAV GEFGIDTANM FEFWDWVGGR YSLWSAIGLS IILSVGFDNF VELLSGAHAM
DKHFSTTPAE KNLPILLALI GIWYNNFFGA ETEAILPYDQ YMHRFAAYFQ QGNMESNGKY
VDRNGNAVDY QTGPIIWGEP GTNGQHAFYQ LIHQGTKMVP CDFIAPAITH NPLSDHHQKL
LSNFFAQTEA LAFGKSREVV EQEYRDQGKD PAQLEHVVPF KVFEGNRPTN SILLREITPF
SLGALIALYE HKIFTQGVIL NIFTFDQWGV ELGKQLANRI LPELGDDKAI SSHDSSTNGL
INRYKAWRA