| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4574 |
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| Symbol | hemE |
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| ID | 6871439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 4414581 |
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| End bp | 4415645 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642787481 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_002218083 |
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| Protein GI | 198242852 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 0.300698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC TCAAAAACGA TCGTTATCTA CGTGCGCTGC TGCGCCAGCC CGTTGATGTT
ACGCCAGTGT GGATGATGCG CCAGGCGGGC CGTTATCTAC CGGAGTACAA AGCCACTCGC
GCTCAGGCGG GCGATTTTAT GTCGCTGTGC AAAAATGCTG AACTGGCCTG CGAGGTCACT
TTACAGCCGC TGCGCCGTTA TCCGCTTGAT GCGGCGATCC TTTTCTCGGA TATCCTGACG
ATTCCGGACG CGATGGGCCT GGGGCTCTAT TTTGAAGCTG GGGAAGGCCC GCGCTTTACG
GCTCCTGTCA CCTGCAAAGC CGACGTTGAA AAACTGCCGA TTCCGGATCC AGAAGGTGAA
CTGGGCTACG TGATGAATGC GGTACGGACC ATCCGCCGCG AACTAAAAGG CGAGGTTCCG
CTGATCGGCT TTTCCGGCAG CCCGTGGACG CTGGCGACTT ACATGGTGGA AGGCGGCAGT
AGCAAAGCCT TCACGGTGAT TAAAAAGATG ATGTACGCTG ACCCGCAGGC GTTGCATCTG
CTGCTGGATA AGTTGGCGAA AAGCGTCACG CTGTACCTCA ACGCGCAGAT TAAAGCGGGT
GCGCAGTCGG TGATGATTTT CGATACCTGG GGCGGCGTGC TGACTGGCCG CGATTACCAG
CAATTCTCCC TCTACTACAT GCATAAAATC GTCGATGGCC TGCTGCGTGA AAACGACGGT
CGCTGCGTGC CGGTAACGCT GTTCACTAAA GGTGGCGGTC AGTGGCTGGA GGCGATGGCG
GAAACCGGCT GCGACGCGCT GGGTCTCGAC TGGACGACAG ATATCGCTGA TGCGCGCCGT
CGCGTTGGCC ATAAAGTGGC GCTGCAGGGC AATATGGACC CCTCGATGCT GTATGCGCCA
CCGGCACGGA TCGAAGACGA AGTAGCGACT ATACTTGCTG GTTTCGGTCA GGGAGAAGGG
CACGTCTTTA ACCTTGGACA TGGCATCCAT CAGGATGTGC CGCCAGAACA TGCTGGCGCA
TTTGTGGAGG CAGTGCACCG ACTTTCTGCG CAGTATCACA ACTAA
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| Protein sequence | MTELKNDRYL RALLRQPVDV TPVWMMRQAG RYLPEYKATR AQAGDFMSLC KNAELACEVT
LQPLRRYPLD AAILFSDILT IPDAMGLGLY FEAGEGPRFT APVTCKADVE KLPIPDPEGE
LGYVMNAVRT IRRELKGEVP LIGFSGSPWT LATYMVEGGS SKAFTVIKKM MYADPQALHL
LLDKLAKSVT LYLNAQIKAG AQSVMIFDTW GGVLTGRDYQ QFSLYYMHKI VDGLLRENDG
RCVPVTLFTK GGGQWLEAMA ETGCDALGLD WTTDIADARR RVGHKVALQG NMDPSMLYAP
PARIEDEVAT ILAGFGQGEG HVFNLGHGIH QDVPPEHAGA FVEAVHRLSA QYHN
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