Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4570 |
Symbol | thiC |
ID | 6874685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 4410927 |
End bp | 4412822 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642787478 |
Product | thiamine biosynthesis protein ThiC |
Protein accession | YP_002218080 |
Protein GI | 198244147 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.0133622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTACAA CAACGTTAAC CCGCCGCGAG CAGCGCGCTA AAGCCCAGCA TTTTATCGAT ACGCTGGAAG GCACCGCGTT TCCCAACTCG AAACGCATCT ACGTGACCGG TTCGCAGCAT GATATTCGCG TACCGATGCG CGAAATTCAA CTTAGCCCCA CGCTCATCGG CGGCAGTAAA GACAACCCGC AGTTTGAAGA GAACGAAGCC GTACCGGTAT ACGACACCTC CGGCCCCTAT GGCGATCCTG AGGTGGCGAT TAACGTCCAG CAGGGTCTGG CGAAACTGCG CCAGCCATGG ATTGACGCAC GTAACGATAG CGAAGAATTA GACGACCGTA GCTCGGCTTA TACCAGAGAA CGTCTGGCCG ACGATGGCCT GGACGATCTG CGTTTTACCG GCCTACTGAC GCCAAAACGC GCTAAAGCGG GCAAGCGCGT CACCCAGTTA CACTACGCCC GCCAGGGGAT CGTCACTCCC GAAATGGAGT TCATCGCCAT CCGTGAAAAT ATGGGCCGTG AGCGCATTCG CAGCGAAGTG CTGCGCCACC AGCATCCGGG GATGAACTTT GGCGCGCGCC TGCCGGAAAA CATCACCCCG GAATTCGTGC GTGATGAAGT CGCCGCGGGC CGCGCGATTA TTCCCGCCAA CATCAACCAC CCGGAATCGG AGCCGATGAT TATCGGCCGC AACTTCCTGG TGAAGGTCAA CGCTAATATC GGTAACTCGG CGGTCACCTC CTCCATCGAA GAAGAGGTGG AAAAACTGGT GTGGTCAACC CGCTGGGGCG CGGATACGGT TATGGACCTC TCCACCGGCC GCTATATCCA CGAAACCCGC GAATGGATCC TGCGTAACAG CCCGGTACCG ATCGGCACCG TCCCGATCTA CCAGGCGCTG GAAAAGGTCA ACGGGATCGC CGAAGATCTT ACCTGGGAAG CGTTCCGCGA CACGCTGCTG GAGCAGGCCG AACAGGGCGT CGACTACTTC ACCATCCACG CCGGCGTGCT GCTGCGCTAC GTGCCGATGA CCGCCAAACG CCTGACCGGT ATTGTCTCGC GCGGCGGTTC GATCATGGCG AAGTGGTGTC TCTCCCATCA CAAAGAGAAC TTCCTGTTCG AACATTTCCG CGAGATCTGC GAAATCTGCG CCGCCTACGA CGTTTCCCTG TCGTTGGGCG ACGGCCTGCG CCCCGGCTCC ATTCAGGACG CCAACGACGA AGCGCAGTTC TCCGAGCTGC ATACGCTGGG CGAGCTGACC AAAATCGCCT GGGAATACGA CGTGCAGGTG ATGATTGAAG GCCCGGGTCA TGTACCCATG CATATGATTC AGCGCAACAT GACCGAAGAG CTGGAGAGCT GCCATGAAGC ACCGTTCTAC ACCTTAGGGC CATTGACTAC CGATATCGCG CCGGGCTATG ACCACTTCAC CTCCGGGATC GGTGCCGCGA TGATCGGCTG GTTTGGCTGC GCGATGCTGT GTTATGTGAC GCCGAAAGAG CATCTCGGCC TGCCGAACAA AGAAGATGTG AAGCAGGGGC TAATCACCTA CAAAATCGCC GCCCACGCCG CGGATTTAGC CAAAGGACAT CCGGGCGCGC AGATCCGCGA TAACGCCATG TCGAAAGCGC GCTTCGAATT CCGCTGGGAA GATCAGTTTA ACCTCGCGCT CGACCCGTTC ACCGCCCGCG CTTATCACGA TGAAACCCTG CCGCAGGAGT CCGGCAAAGT CGCCCACTTC TGTTCCATGT GCGGGCCGAA ATTCTGCTCG ATGAAAATCA GCCAGGGGGT CCGCGACTAC GCCGCCGCGC AAGCCATTGA AGTCGGCATG GCGGATATGT CGGAGAACTT CCGCGCCAAA GGCGGCGAAA TTTATCTCAA ACGGGAGGAA GCCTGA
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Protein sequence | MSTTTLTRRE QRAKAQHFID TLEGTAFPNS KRIYVTGSQH DIRVPMREIQ LSPTLIGGSK DNPQFEENEA VPVYDTSGPY GDPEVAINVQ QGLAKLRQPW IDARNDSEEL DDRSSAYTRE RLADDGLDDL RFTGLLTPKR AKAGKRVTQL HYARQGIVTP EMEFIAIREN MGRERIRSEV LRHQHPGMNF GARLPENITP EFVRDEVAAG RAIIPANINH PESEPMIIGR NFLVKVNANI GNSAVTSSIE EEVEKLVWST RWGADTVMDL STGRYIHETR EWILRNSPVP IGTVPIYQAL EKVNGIAEDL TWEAFRDTLL EQAEQGVDYF TIHAGVLLRY VPMTAKRLTG IVSRGGSIMA KWCLSHHKEN FLFEHFREIC EICAAYDVSL SLGDGLRPGS IQDANDEAQF SELHTLGELT KIAWEYDVQV MIEGPGHVPM HMIQRNMTEE LESCHEAPFY TLGPLTTDIA PGYDHFTSGI GAAMIGWFGC AMLCYVTPKE HLGLPNKEDV KQGLITYKIA AHAADLAKGH PGAQIRDNAM SKARFEFRWE DQFNLALDPF TARAYHDETL PQESGKVAHF CSMCGPKFCS MKISQGVRDY AAAQAIEVGM ADMSENFRAK GGEIYLKREE A
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