| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4568 |
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| Symbol | thiF |
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| ID | 6871855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 4409541 |
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| End bp | 4410299 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642787476 |
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| Product | thiazole biosynthesis adenylyltransferase ThiF |
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| Protein accession | YP_002218078 |
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| Protein GI | 198245874 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 |
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| TIGRFAM ID | [TIGR02356] thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.00103081 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGACC GCGATTTTAT GCGCTACAGC CGGCAAATCC TGCTCGGCGA TATCGCCATT
GAAGGCCAGC AAAAGCTGCT CGCGAGTCAT GTACTGATCG TAGGTTTAGG CGGGTTAGGT
TCACCCGCCG CGCTGTATCT GGCGGGAGCA GGCATTGGCA AACTGACGCT GGCAGACGAT
GACGACATTC ATCTGAGCAA TTTGCAGCGC CAGATCCTGT TTACCACCGA TGATATCGCG
CGTTCGAAAT CCCAGGTTGC CCGGCAGCGC CTGACGCAGC TCAACCCGGA TATCGAACTG
GTCTCGCTCC AGCAGCGACT AAAAGGCGAT GCGCTCCGGC ATGCGGTCTC GCGAGCCGAC
GTGGTGCTCG ACTGTACCGA TAACATGTCC ACGCGCCAGG AAATCAACGC CGCCTGCGTC
GCGCTCAATA CCCCACTCAT CACCGCCAGC GCCGTCGGCT TTGGCGGCCA GTTGATGGTG
CTCACGCCAC CGTGGGAACA AGGCTGTTAC CGCTGCCTGT GGCCAGATGA TGTGGAGCCG
GAACGCAACT GCCGCACCGC TGGGGTGCTC GGTCCGGTGG TGGGCGTGAT GGGTACCTTG
CAGGCGCTGG AGGCGATTAA ATTACTCAGC GGTATTGAAA CACCGAACGG GCAGCTACGT
CTGTTTGACG GCAAAACCAG CCAGTGGCGC AGCCTCGCGC TGCGTCGCGC CAGCGGCTGT
CCGGTATGCG GAGGGCAGCA TGCAAATTCA ATTCAATGA
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| Protein sequence | MNDRDFMRYS RQILLGDIAI EGQQKLLASH VLIVGLGGLG SPAALYLAGA GIGKLTLADD
DDIHLSNLQR QILFTTDDIA RSKSQVARQR LTQLNPDIEL VSLQQRLKGD ALRHAVSRAD
VVLDCTDNMS TRQEINAACV ALNTPLITAS AVGFGGQLMV LTPPWEQGCY RCLWPDDVEP
ERNCRTAGVL GPVVGVMGTL QALEAIKLLS GIETPNGQLR LFDGKTSQWR SLALRRASGC
PVCGGQHANS IQ
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