| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4514 |
|---|
| Symbol | gldA |
|---|
| ID | 6874444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 4353776 |
|---|
| End bp | 4354879 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642787427 |
|---|
| Product | glycerol dehydrogenase |
|---|
| Protein accession | YP_002218038 |
|---|
| Protein GI | 198245651 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0371] Glycerol dehydrogenase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.000391797 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGCA TTATTCAGTC ACCAGGTAAG TATATTCAGG GTGCAAACGT CATCGCGCGT
CTTGGCGATT ATTTAAAACC AATGGCGAAC AACTGGCTGG TTGTGGGCGA TAAATTCGTG
CTGGGATTTG CCGAAGAGAC GCTGCGCAAA AGCCTGACGG ATGCCGGTTT GTCAGTAGAA
ATCGCCCCGT TTGGCGGCGA ATGTTCGCAA AATGAGATCG ACAGGCTGCG CGCCGTCGCC
GAAAAAAGTC AGTGTGGCGC CGTACTGGGT ATCGGCGGCG GTAAAACGCT GGATACCGCC
AAAGCGCTGG CGCACTTTAT GAATGTCCCG GTCGCTATCG CGCCGACCAT CGCCTCTACC
GACGCACCGT GCAGCGCACT CTTGGTTATT TATACCGATG CCGGTGAGTT TGACCGTTAT
CTGCTGCTGC CGCATAACCC GAATATGGTC ATTGTCGATA CGCAGATAGT GGCGGGCGCG
CCGGCGCGTC TGCTGGCAGC CGGTATCGGC GATGCGCTGG CGACCTGGTT TGAAGCGCGC
GCCTGCTCAC GCAGCGGCGC CACCACAATG GCGGGCGGCA AGTGTACACA GGCCGCGCTG
GCGCTGGCGG AGCTATGCTA TAACACGCTG ATCGAAGAAG GCGAAAAAGC CATGTTGGCC
GCCGAACAGC ACGTCGTCAC GCCAGCGCTG GAACGCGTCA TCGAAGCCAA CACCTACCTG
AGCGGGGTCG GTTTTGAAAG CGGCGGTCTG GCCGCAGCGC ACGCGATTCA TAACGGTTTA
ACGGCGATTC CGGATGCGCA CCACTATTAT CACGGTGAGA AGGTCGCTTT CGGTACGCTG
ACGCAACTGG TGCTGGAAAA CGCGCCGGTC GAAGAAATCG AAACCGTTGC GGCGCTGTGC
CATTCCGTTG GCCTGCCGAT TACGCTGGCG CAACTGGATA TTAAACAGGA TATTCCGGCA
AAAATGCGCA CCGTCGCGGA AGCCTCCTGC GCAGAAGGTG AAACTATTCA TAACATGCCT
GGCGGCGCAA CGCCGGATGA AGTGTACGCC GCGCTGCTGG TCGCCGACCA GTACGGTCAA
CGCTTTTTGC AGGAATGGGA ATAA
|
|---|
| Protein sequence | MDRIIQSPGK YIQGANVIAR LGDYLKPMAN NWLVVGDKFV LGFAEETLRK SLTDAGLSVE
IAPFGGECSQ NEIDRLRAVA EKSQCGAVLG IGGGKTLDTA KALAHFMNVP VAIAPTIAST
DAPCSALLVI YTDAGEFDRY LLLPHNPNMV IVDTQIVAGA PARLLAAGIG DALATWFEAR
ACSRSGATTM AGGKCTQAAL ALAELCYNTL IEEGEKAMLA AEQHVVTPAL ERVIEANTYL
SGVGFESGGL AAAHAIHNGL TAIPDAHHYY HGEKVAFGTL TQLVLENAPV EEIETVAALC
HSVGLPITLA QLDIKQDIPA KMRTVAEASC AEGETIHNMP GGATPDEVYA ALLVADQYGQ
RFLQEWE
|
|---|
| |