Gene SeD_A4395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4395 
SymbolglnL 
ID6873100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4241226 
End bp4242275 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content57% 
IMG OID642787316 
Productnitrogen regulation protein NR(II) 
Protein accessionYP_002217927 
Protein GI198243097 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCG GCATACAGCC CGATGCTGGG CAGATCCTCA ATTCGTTAAT CAACAGCGTG 
CTGGTGGTCG ACGACGCGCT GGCAATCCAT TACGCCAACC CTGCCGCGCA GCAGTTGCTC
GCGCAAAGCT CACGCAAACT GTTCGGGACG CCGTTACCTG AACTGTTGAG CTATTTTTCG
TTAAACATTG ACCTGATGCG CGAAAGTTTA GCGGCAGGGC AAGGCTTTAC CGATAACGAA
GTGACGCTGG TGATTGATAG TCGCTCGCAT ATTCTCTCTT TGACCGCCCA ACGTCTGCCC
GACGATTTTA TACTGCTCGA AATGGCGCCG ATGGATAACC AGCGTCGTCT GAGTCAGGAG
CAGTTGCAGC ACGCGCAGCA AATCGCCGCC CGCGATCTGG TGCGCGGTCT GGCACACGAA
ATCAAAAATC CGCTCGGCGG CCTGCGCGGC GCGGCGCAGC TACTCAGCAA GGCGCTGCCC
GACCCGGCGC TAACGGAATA TACCAAAGTC ATCATTGAAC AGGCCGACAG GCTACGCAAC
CTTGTCGATC GTTTGCTGGG GCCGCAGCAC CCGGGAATGC ACATTACCGA GAGCATACAT
AAAGTCGCGG AGCGCGTGGT GGCGCTGGTG TCGATGGAAC TGCCGGATAA TGTCCGGCTT
ATCCGCGATT ACGACCCCAG TCTGCCAGAA CTGCCGCATG ACCCGGAACA AATTGAGCAA
GTACTGCTGA ATATTGTCCG CAATGCCTTG CAGGCGCTGG GGCCGGATGG CGGCGAAATT
ACGCTGCGTA CCCGTACCGC CTTCCAGTTA ACGCTGCATG GCGAACGCTA TCGCCTGGCG
GCGCGTATAG ACGTTGAAGA CAATGGGCCG GGCATTCCTC CCCATTTACA GGATACGCTG
TTCTACCCGA TGGTCAGCGG TCGCGAAGGC GGCACCGGGC TTGGGTTATC TATCGCCCGC
AATCTTATCG ATCAACACGC CGGCAAAATT GAATTTACCA GTTGGCCGGG GCATACCGAG
TTTTCGGTTT ACCTGCCGAT TCGGAAATAG
 
Protein sequence
MASGIQPDAG QILNSLINSV LVVDDALAIH YANPAAQQLL AQSSRKLFGT PLPELLSYFS 
LNIDLMRESL AAGQGFTDNE VTLVIDSRSH ILSLTAQRLP DDFILLEMAP MDNQRRLSQE
QLQHAQQIAA RDLVRGLAHE IKNPLGGLRG AAQLLSKALP DPALTEYTKV IIEQADRLRN
LVDRLLGPQH PGMHITESIH KVAERVVALV SMELPDNVRL IRDYDPSLPE LPHDPEQIEQ
VLLNIVRNAL QALGPDGGEI TLRTRTAFQL TLHGERYRLA ARIDVEDNGP GIPPHLQDTL
FYPMVSGREG GTGLGLSIAR NLIDQHAGKI EFTSWPGHTE FSVYLPIRK