Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4369 |
Symbol | fadB |
ID | 6872864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 4216308 |
End bp | 4218623 |
Gene Length | 2316 bp |
Protein Length | 771 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642787293 |
Product | multifunctional fatty acid oxidation complex subunit alpha |
Protein accession | YP_002217909 |
Protein GI | 198245124 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCTCTG CCGAGCGTGA TCACATCGGC ATTTCTTTAA TCATTTATTT GCATTTTATT AACACAAAAT ACACACTTCG CTTCATCTGG TACGACCAGA TCACCTTGTG GATTCAGGAG ACTGACATGC TTTATAAAGG CGACACCCTG TACCTCGACT GGCTGGAAGA TGGCATCGCC GAACTGGTGT TCGATGCTCC AGGCTCGGTC AATAAACTCG ACACCGCAAC CGTCGCCAGC CTCGGCCAGG CGCTTGAGGT GCTGGAAAAG CAACACGATT TAAAAGGGCT GCTGCTGCGC TCTAATAAAG CGGCCTTTAT TGTCGGCGCG GACATCACCG AATTTCTTTC ACTGTTCCTC GTCCCCGAAG AGCAGTTAAG CCAATGGCTG CATTTCGCTA ATAGCGTCTT TAACCGTCTG GAAGATTTAC CCGTACCGAC CCTTGCCGCC GTAAACGGCT ATGCGTTGGG CGGCGGGTGC GAATGCGTGC TGGCCACCGA TTACCGTCTG GCGACGCCAG ACCTCCGTAT CGGTCTGCCG GAAACTAAAC TGGGCATCAT GCCGGGTTTC GGCGGCTCCG TTCGTCTGCC GCGTATGCTG GGCGCAGACA GCGCGCTGGA GATTATCGCG GCAGGTAAAG ATGTCGGTGC TGAGCACGCG CTGAAAATCG GCCTTGTGGA CGGCGTGGTC AAACAAGAGA AGCTAATTGA AGGCGCGATA GCGGTGTTAC GCCAGGCCAT TACCGGCGAT CTCGACTGGA GAGCTAAACG CCAGCCGAAA CTGGAACCGT TGAAACTCAG TAAGATTGAA GCGGCGATGA GCTTTACCAT CGCTAAAGGC ATGGTCGCAC AAACGGCGGG TAAACATTAT CCGGCGCCGA TGACCGCAGT GAAAACCATT GAAGCCGCCG CGCGTTTTGG TCGTGAAGAA GCGCTGAATC TGGAAAATAA AAGCTTTGTT CCGCTGGCGC ATACCAATGA GGCTCGTGCG CTGGTCGGTA TCTTCCTCAA CGATCAATAT GTAAAAGGTA AAGCCAAAAA GCTGACCAAA GATATTGAGA CGCCGAAACA GGCAGCCGTA CTGGGCGCGG GCATTATGGG CGGCGGTATC GCTTACCAGT CGGCCTGGAA AGGCGTACCG GTCATCATGA AAGATATCAA CGATAAATCG TTGAACCTCG GCATGACCGA AGCGGCCAAG CTGCTGAACA AACAGCTGGA GCGCGGCAAG ATCGACGGTC TGAAGCTGGC GGGCGTCATT TCGACCATCC ACCCGACTCT CGATTATGCC GGTTTCGATC GCGTAGATGT TGTTGTCGAA GCGGTAGTCG AAAATCCGAA AGTGAAAAAA GCGGTACTGG CGGAAACCGA GCAGAAAGTG CGCCCGGAAA CCGTGCTGGC CTCAAATACC TCCACCATCC CAATTGGCGA ACTGGCAAGC GCCCTGGAAC GTCCGGAAAA CTTTTGCGGA ATGCACTTCT TCAACCCGGT ACACCGGATG CCGCTGGTTG AAATCATTCG CGGCGAGAAG AGTTCAGACG AAACCATCGC CAAAGTCGTC GCCTGGGCCA GCAAAATGGG CAAGACGCCG ATTGTAGTCA ACGACTGCCC CGGCTTCTTT GTTAACCGCG TGCTGTTCCC CTATTTCGCC GGTTTCAGTC AACTGCTGCG CGACGGCGCG GATTTCCGCA AAGTCGATAA AGTGATGGAA AAACAGTTCG GCTGGCCGAT GGGCCCGGCC TATCTGCTCG ACGTGGTGGG TATTGATACC GCCCACCACG CGCAGGCGGT AATGGCGGCA GGCTTCCCAC AACGGATGCA GAAAGAGTAT CGCGACGCGA TCGACGCATT GTTTGACGCC AGCCGTTTTG GGCAAAAAAA CGGTCTGGGC TTCTGGCGCT ATAAAGAAGA CAGCAAGGGT AAGCCGAAGA AAGAAGAAGA TGCTGCGGTG GATGACCTGC TGGCAAGCGT CAGTCAGACG AAACGCGACT TCAGCGACGA CGAGATAATC GCCCGTATGA TGATCCCGAT GATTAACGAA GTGGTTCGCT GTCTGGAAGA AGGCATTATC GCAAGCCCGG CGGAAGCCGA TATGGCGCTG GTCTACGGCC TGGGCTTCCC TCCGTTCCAC GGCGGCGCAT TCCGCTGGCT GGATACACAG GGCAGCGCGA AATATCTTGA TATGGCGCAG CAGTATCAAC ACCTCGGCCC GCTGTATGAA GTGCCGGAAG GGCTGCGTAA TAAAGCGCGC CATAACGAAC CGTATTATCC CCCGGTTGAA CCAGCCCGTC CGGTTGGTTC TCTGAAAACG GCTTAA
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Protein sequence | MISAERDHIG ISLIIYLHFI NTKYTLRFIW YDQITLWIQE TDMLYKGDTL YLDWLEDGIA ELVFDAPGSV NKLDTATVAS LGQALEVLEK QHDLKGLLLR SNKAAFIVGA DITEFLSLFL VPEEQLSQWL HFANSVFNRL EDLPVPTLAA VNGYALGGGC ECVLATDYRL ATPDLRIGLP ETKLGIMPGF GGSVRLPRML GADSALEIIA AGKDVGAEHA LKIGLVDGVV KQEKLIEGAI AVLRQAITGD LDWRAKRQPK LEPLKLSKIE AAMSFTIAKG MVAQTAGKHY PAPMTAVKTI EAAARFGREE ALNLENKSFV PLAHTNEARA LVGIFLNDQY VKGKAKKLTK DIETPKQAAV LGAGIMGGGI AYQSAWKGVP VIMKDINDKS LNLGMTEAAK LLNKQLERGK IDGLKLAGVI STIHPTLDYA GFDRVDVVVE AVVENPKVKK AVLAETEQKV RPETVLASNT STIPIGELAS ALERPENFCG MHFFNPVHRM PLVEIIRGEK SSDETIAKVV AWASKMGKTP IVVNDCPGFF VNRVLFPYFA GFSQLLRDGA DFRKVDKVME KQFGWPMGPA YLLDVVGIDT AHHAQAVMAA GFPQRMQKEY RDAIDALFDA SRFGQKNGLG FWRYKEDSKG KPKKEEDAAV DDLLASVSQT KRDFSDDEII ARMMIPMINE VVRCLEEGII ASPAEADMAL VYGLGFPPFH GGAFRWLDTQ GSAKYLDMAQ QYQHLGPLYE VPEGLRNKAR HNEPYYPPVE PARPVGSLKT A
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