Gene SeD_A4271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4271 
Symbol 
ID6871294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4116306 
End bp4117802 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content54% 
IMG OID642787201 
Productregulatory ATPase RavA 
Protein accessionYP_002217827 
Protein GI198244311 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.64828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCACC CACATTTATT AGCGGAAAGA ATTTCCCGTC TGAGCAGCGC CCTTGAGAAG 
GGACTGTATG AACGTAGTCA TGCCATACGC CTTTGCCTAC TGGCGGCGTT AAGCGGTGAG 
AGCGTCTTTT TGTTGGGCCC GCCCGGTATC GCCAAGAGTC TGATTGCCCG CCGCCTGAAG 
TTTGCTTTCC AGCGCGCCCG CGCTTTTGAA TATCTGATGA CACGCTTTTC CACGCCGGAA 
GAGGTTTTTG GCCCGCTCTC TATTCAGGCG CTGAAAGATG AAGGTCGCTA TGAACGCTTA 
ACGACCGGCT ACCTTCCCGA AGCCGAAATC GTTTTTCTGG ATGAAATCTG GAAAGCCGGG 
CCCGCTATCC TGAACACATT GCTGACCGCC ATTAACGAAC GCCATTTCCG CAACGGCGCA 
TTTGAGGAAA AAATTCCGAT GCGGCTGCTG GTGGCGGCCT CTAACGAACT GCCCGAAGCG 
GACAGCAGCC TGGAAGCCTT GTACGACCGA ATGTTGATTC GTCTGTGGCT GGATAAAGTT 
CAGGATAAAG CCAATTTCCG CTCCATGCTG GTTAGTCAGC AGGATGAGAG TGATAACCCG 
GTCCCCGCCT CGTTACAGGT AAGCGACGAA GAATATCAAC AGTGGCAAAA AGATATCGGC 
GCGATTTCAC TGCCTGATCC GGTCTTTGAG CTGATATTTA CTCTGCGCCA ACAGCTGGAT 
AATTTGCCGA ATGCGCCTTA TGTCTCCGAC CGTCGCTGGA AGAAAGCCAT CCGCCTGTTA 
CAGGCCAGCG CCTTCTTTAG CGGACGTGAC GCGGTTGCGC CGATTGACCT TATCCTGCTA 
AAAGATTGCT TGTGGTATGA CGCGCAGAGT CTGAATCTCA TGCAACAGCA ACTGGAAATA 
TTGATGACCG GACACGCCTG GCAGCAGCAG GCCATGCTGA CTCGCCTCGG CGGTATTGTC 
CAGCGCCGCC TCCAGTTGCA GCAACAGCAA AGCGATAAAA CCGCCTTCAC CGTCATTAAA 
GAAGGCGGTA TGTTCAGCCG CCGCCCGCAT TACACTTTAC CGCCGGAAGC CAGTGCGTCA 
ACGTTGACGT TATTGCTACA AAAACCGCTA AAACTGCATG ATATGGAAGT GATCCATATT 
ACCTTTGACC GCAGCGCGCT GGAACTTTGG CTGACCAAAG GCGGCGAGAT CCGCGGCAAA 
CTGAACGGGA TCGGCTTTGC CCAAACGCTG AATATGGAAG TCGATAACGC TCAACATCTG 
GTGGTGCGCG ACATCAGTCT ACAAGGTACC CGTCTGGCGT TACCGGGAGC GGCTGAAGAC 
AGTATGCCTG CGGAGATCAA ACAGCAGCTG GAAACGTTAG AAAACGACTG GCGCCAGCAG 
CATACTCGCT TCAGCGAGCA GCAACATTGC CTGTTTATTC ACAGCGACTG GTTAGGGCGC 
ATTGAGGCCA GCCTGCAGGA TGTAGGAGAA CAGATCCGCC AGGCGCAACA ATGCTGA
 
Protein sequence
MAHPHLLAER ISRLSSALEK GLYERSHAIR LCLLAALSGE SVFLLGPPGI AKSLIARRLK 
FAFQRARAFE YLMTRFSTPE EVFGPLSIQA LKDEGRYERL TTGYLPEAEI VFLDEIWKAG 
PAILNTLLTA INERHFRNGA FEEKIPMRLL VAASNELPEA DSSLEALYDR MLIRLWLDKV 
QDKANFRSML VSQQDESDNP VPASLQVSDE EYQQWQKDIG AISLPDPVFE LIFTLRQQLD 
NLPNAPYVSD RRWKKAIRLL QASAFFSGRD AVAPIDLILL KDCLWYDAQS LNLMQQQLEI 
LMTGHAWQQQ AMLTRLGGIV QRRLQLQQQQ SDKTAFTVIK EGGMFSRRPH YTLPPEASAS 
TLTLLLQKPL KLHDMEVIHI TFDRSALELW LTKGGEIRGK LNGIGFAQTL NMEVDNAQHL 
VVRDISLQGT RLALPGAAED SMPAEIKQQL ETLENDWRQQ HTRFSEQQHC LFIHSDWLGR 
IEASLQDVGE QIRQAQQC