| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4235 |
|---|
| Symbol | |
|---|
| ID | 6872362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 4082805 |
|---|
| End bp | 4083992 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642787167 |
|---|
| Product | multidrug efflux system protein MdtL |
|---|
| Protein accession | YP_002217793 |
|---|
| Protein GI | 198244845 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.637245 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 85 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTT TTCTACTGTG TAGTTTTGCC CTGGTTTTAC TCTATCCTGC CGGTATTGAT
ATGTATCTGG TCGGTTTACC GCGTATAGCC GCCGATCTGA ACGCCAGCGA GGCGCAGTTG
CATATCGCCT TCTCCGTTTA CCTGGCCGGA ATGGCGACGG CCATGCTGTT TGCCGGGAAG
ATAGCCGATC AGTCAGGCCG CAAACCGGTC GCGATCGTCG GCGCGATCGT CTTTATGATG
GCCTCACTGC TTTGTTCACG GGCGTCGGAA GGCTCGCTAT TTCTGAGTGG GCGTTTTCTT
CAGGGAATAG GTGCAGGCGG CTGCTATGTG GTGGCGTTCG CCATTCTGCG CGACACGCTC
GACGAGCATC GCCGGGCGAA AGTGCTGTCA TTATTGAATG GGATTACCTG TATTGTGCCG
GTACTCGCCC CGGTGGTGGG GCATTTGATT ATGCTTCGTT TCCCCTGGCA AAGTCTGTTC
TATACGATGT CCGCGATGGG CATTATTGTG GGCCTGTTAT CACTGTTTAT CCTGCGCGAG
ACGCGCCCGG TAAGGCTGGC TCCACGCGAT TTATCACGAT CGTCGCCCGC CGCCGAGTCG
CTGATTAACC GTTTTTTCGT TAGTCGACTG GCGATCACCA CCCTTAGCGT GTCGGTGATC
CTGACCTTTG TCAATGCCTC TCCAGTGCTG CTGATGGAGG TGATGGGATT TAGCCGTGGC
GACTATGCCA TTACCATGGC GCTCACCGCA GGCGTCAGTA TGGTCGTCTC TTTTTCCACC
CCTTTTGCGC TTGGGTTATT TAAGCCGCGA ACCTTAATGC TCGTCTCACA GGGGCTGTTT
TTGACGGCTG GCGTGACGTT AAGCCTTGCT CATACCAATA CCGTCACACT CTTTGGCCTG
ACGCTTATCT GCGCCGGATT CTCGGTTGGT TTTGGCGTCG CGATGAGCCA GGCGCTGGGG
CCGTTTTCGC TGCGCGCTGG AGTGGCCAGT TCCACGCTCG GTATCGCGCA GGTTTGCGGT
TCATCACTGT GGATTTGGCT GGCGGCAATA CTCGGTATCA GCGCGATGAA TATGCTGATC
GGGATTCTGA TTGGTTGTAG CATAGTGAGT ATTCTGCTGA TCTTCTCCGT CACGCCCAAC
AGGTCCGTAG CCGAGCATGA AGAAATCCCT TACCAATCTC GACCTTAA
|
|---|
| Protein sequence | MKRFLLCSFA LVLLYPAGID MYLVGLPRIA ADLNASEAQL HIAFSVYLAG MATAMLFAGK
IADQSGRKPV AIVGAIVFMM ASLLCSRASE GSLFLSGRFL QGIGAGGCYV VAFAILRDTL
DEHRRAKVLS LLNGITCIVP VLAPVVGHLI MLRFPWQSLF YTMSAMGIIV GLLSLFILRE
TRPVRLAPRD LSRSSPAAES LINRFFVSRL AITTLSVSVI LTFVNASPVL LMEVMGFSRG
DYAITMALTA GVSMVVSFST PFALGLFKPR TLMLVSQGLF LTAGVTLSLA HTNTVTLFGL
TLICAGFSVG FGVAMSQALG PFSLRAGVAS STLGIAQVCG SSLWIWLAAI LGISAMNMLI
GILIGCSIVS ILLIFSVTPN RSVAEHEEIP YQSRP
|
|---|
| |