Gene SeD_A4222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4222 
SymboldgoR 
ID6875582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp4066302 
End bp4066991 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content54% 
IMG OID642787155 
Productgalactonate operon transcriptional repressor 
Protein accessionYP_002217781 
Protein GI198241897 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTCA ATAAAACCGA TCGCATCGTT ATCACGCTGG GCAAACAGAT TGTCAGCGGT 
AAATACGTAC CCGGTTCGGC GCTGCCAGCG GAAGCGGATC TGTGCGAGGA GTTTGAAACG 
TCGCGCAACA TCATTCGCGA AGTGTTTCGT TCGCTTATGG CGAAGCGGCT AATTGAAATG 
AAGCGCTATC GCGGCGCGTT TATCGCACCG CGTAACCAGT GGAATTATCT CGATACCGAC 
GTGCTGCAAT GGGTGCTGGA AAATGACTAC GACCCGAGGC TTATCAGCGC GATGAGCGAA 
ATACGAAACC TGGTGGAGCC AGCAATAGCA CGCTGGGCGG CGGAACGGGC AACATCAAGC 
GATCTGGCTG AAATTGAGTC GGCGCTAAAC GACATGATTG CCAACAACCA GGACCGGGAA 
GCGTTTAACG AGGCGGATAT TCGCTATCAC GAGGCAGTGT TGCAGTCGGT GCATAACCCG 
GTGCTGCAAC AGTTAAATGT AGCGATCAGC TCGCTACAGC GAGCGGTATT TGAACGGACC 
TGGATGGGCG ATGCGGCCAA CATGCCGAAA ACGCTCCAGG AACATAAGGC GCTATTCGAT 
GCGATACGGC ATCAGGATGG CGATGCGGCA GAGCAGGCGG CATTAACCAT GATCGCCAGC 
TCGACACGAA GGTTAAAGGA AATCACATGA
 
Protein sequence
MTLNKTDRIV ITLGKQIVSG KYVPGSALPA EADLCEEFET SRNIIREVFR SLMAKRLIEM 
KRYRGAFIAP RNQWNYLDTD VLQWVLENDY DPRLISAMSE IRNLVEPAIA RWAAERATSS 
DLAEIESALN DMIANNQDRE AFNEADIRYH EAVLQSVHNP VLQQLNVAIS SLQRAVFERT 
WMGDAANMPK TLQEHKALFD AIRHQDGDAA EQAALTMIAS STRRLKEIT