| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4185 |
|---|
| Symbol | ilvB |
|---|
| ID | 6871680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 4028944 |
|---|
| End bp | 4030632 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642787118 |
|---|
| Product | acetolactate synthase catalytic subunit |
|---|
| Protein accession | YP_002217744 |
|---|
| Protein GI | 198242310 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 77 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGTT CGGGCACAAC ATCTACACCT CAGCGCTTTA CGGGCGCGGA ATTTATTGTT
CATTTTCTGG AGCGCCAGGG GATTCGTATC GTCACCGGCA TTCCCGGCGG TTCGATCCTC
CCCGTTTACG ACGCGTTAAG CCAAAGTACG CAAATCCGTC ATATTCTGGC GCGCCACGAA
CAAGGCGCGG GGTTTATTGC GCAGGGGATG GCGCGGACGG AGGGTAAACC TGCTGTTTGT
ATGGCCTGTA GCGGGCCGGG CGCGACCAAT CTGGTCACGG CCATTGCCGA TGCGCGCCTG
GATTCTATTC CGTTAATCTG TATTACCGGG CAGGTTCCGG CGTCCATGAT CGGTACTGAC
GCGTTTCAGG AAGTGGATAC CTACGGTATC TCTATCCCCA TCACCAAGCA CAACTATCTG
GTCAGAAATA TCAATGAGTT GCCTCAGGTG ATGAGCGATG CTTTTCGTCT GGCGCAGTCG
GGGCGTCCCG GCCCGGTGTG GATAGACGTT CCTAAAGATG TGCAGACGGC GACAATTGAG
CTGGATGCGT TGCCGTCGCC GGCGGAAAAA TCACCCCCGC CGGAGTTTAG CGCGGAGAGT
ATCCGCGAGG CCGCCGCAAT GATTAACGCG GCGAAGCGTC CGGTGCTGTA TCTGGGCGGC
GGCGTGATCA ATGCGCCGAC ACGCGTGCGC GAACTGGCGG AAAAAGCGCA ACTGCCGACG
ACAATGACCT TAATGGCGCT GGGAATGCTG CCTAAGGCGC ATCCGCTGTC GTTAGGAATG
CTGGGGATGC ACGGCGCGCG CAGTACCAAT TTTATTCTGC AAGAGGCCGA TTTACTGATT
GTTCTGGGCG CGCGTTTTGA TGACCGGGCG ATTGGCAAAA CGGAGCAGTT TTGTCCGAAC
GCCAAAATCA TCCATGTGGA TATCGATCGC GCCGAGTTAG GCAAAATTAA GCAGCCGCAT
GTGGCTATTC AGGCGGATGT CGATGATGTA CTGGCACAGT TAATTCCCCA TATCGAGGCA
CAGCCGCGGG AAGCATGGCA TCAGTTGGTG GCGGACTTGC AGCAAGAATT CCCTTGCAGT
ATTCCCCAGG AAAATAACCC GCTTAGTCAC TATGGGCTGA TTAACGCGGT CGCCGCCTGT
GTGGACGACA ACGCGATTAT TACCACTGAC GTAGGTCAGC ATCAGATGTG GACCGCGCAG
GCTTATCCGC TCAACCGTCC GCGTCAGTGG CTGACTTCCG GCGGGCTGGG CACCATGGGG
TTTGGTCTGC CCGCGGCGAT TGGCGCGGCG CTGGCGAATC CGGGCAACAA GGTGCTGTGT
TTTTCCGGCG ACGGTAGTTT GATGATGAAT ATTCAGGAGA TGGCTACCGC CAGTGAAAAC
CAGTTGGATG TGAAAATCAT CCTGATGAAT AACGACGCGC TGGGACTGGT ACATCAGCAA
CAGAGTCTGT TCTATAAACA GGGCGTTTTT GCGGCGACCT ATCCGGGAAG CATCAACTTT
ATGCAGATTG CCGCCGGGTT TGGTCTGGAC ACCTGTGATT TGAATAACGA AGCCGATCCG
CAGGCGGCGT TGCAGGCTAT CATTCGTCGT CCTGGACCGG CGTTGATCCA TGTGCGCATT
GATGCAGAAG AAAAAGTGTA TCCGATGGTG CCGCCGGGCG CGGCAAATAC AGAGATGGTG
GGGGAATAA
|
|---|
| Protein sequence | MASSGTTSTP QRFTGAEFIV HFLERQGIRI VTGIPGGSIL PVYDALSQST QIRHILARHE
QGAGFIAQGM ARTEGKPAVC MACSGPGATN LVTAIADARL DSIPLICITG QVPASMIGTD
AFQEVDTYGI SIPITKHNYL VRNINELPQV MSDAFRLAQS GRPGPVWIDV PKDVQTATIE
LDALPSPAEK SPPPEFSAES IREAAAMINA AKRPVLYLGG GVINAPTRVR ELAEKAQLPT
TMTLMALGML PKAHPLSLGM LGMHGARSTN FILQEADLLI VLGARFDDRA IGKTEQFCPN
AKIIHVDIDR AELGKIKQPH VAIQADVDDV LAQLIPHIEA QPREAWHQLV ADLQQEFPCS
IPQENNPLSH YGLINAVAAC VDDNAIITTD VGQHQMWTAQ AYPLNRPRQW LTSGGLGTMG
FGLPAAIGAA LANPGNKVLC FSGDGSLMMN IQEMATASEN QLDVKIILMN NDALGLVHQQ
QSLFYKQGVF AATYPGSINF MQIAAGFGLD TCDLNNEADP QAALQAIIRR PGPALIHVRI
DAEEKVYPMV PPGAANTEMV GE
|
|---|
| |