Gene SeD_A4176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4176 
SymboluhpT 
ID6874759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4019207 
End bp4020598 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content55% 
IMG OID642787109 
Productsugar phosphate antiporter 
Protein accessionYP_002217735 
Protein GI198244401 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00881] phosphoglycerate transporter family protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCCT TCTTAAACCA GGTGCGCAAG CCGACCCTGG ATCTGCCGCT CGATGTGCGG 
CGTAAAATGT GGTTCAAGCC GTTCATGCAG TCCTATCTGG TGGTTTTTAT CGGCTACCTG
ACCATGTACC TGATCCGCAA AAACTTTAAC ATCGCGCAGA ACGACATGAT TTCTACCTAC
GGGTTGAGCA TGACCGAGCT GGGGATGATT GGCCTGGGCT TCTCGATCAC CTACGGCGTG
GGGAAAACGC TGGTTTCCTA CTACGCTGAC GGTAAAAATA CCAAGCAGTT TCTACCGTTT
ATGTTGATCC TCTCCGCTAT CTGTATGCTC GGCTTCAGCG CCAGCATGGG CGCGGGGTCA
ACCAGTCTGT TTCTGATGAT CGCTTTCTAT GCCCTGAGCG GTTTCTTCCA GAGTACCGGC
GGATCGTGCA GCTACTCGAC CATCACCAAA TGGACTCCGC GTCGTAAACG CGGCACCTTT
CTCGGCTTCT GGAATATCTC CCACAACCTC GGCGGCGCGG GCGCGGCAGG CGTGGCGCTG
TTCGGCGCCA ACTACCTGTT CGACGGTCAC GTCATCGGCA TGTTTATCTT CCCGTCGATT
ATCGCGCTGA TTGTTGGCTT TATCGGTCTG CGTTTTGGCA GCGACTCCCC GGAGTCTTAC
GGTCTGGGCA AAGCTGAAGA ACTGTTCGGC GAAGAGATCA GCGAAGAGGA TAAAGAGACT
GAAGAAAACG AAATGACCAA GTGGCAGATC TTTGTTGAAT ATGTGTTGAA AAACAAAGTG
ATCTGGCTGC TGTGTTTCTC CAATATCTTC CTGTATGTGG TACGTATTGG TATCGACCAG
TGGTCAACCG TCTACGCCTT CCAGGAACTG AAACTTTCAA AAGAGGTGGC GATTCAGGGC
TTTACCCTGT TCGAAGTGGG CGCGCTGGTC GGCACGTTGC TGTGGGGCTG GCTCTCTGAC
CTGGCGAACG GTCGTCGCGC GCTGGTAGCC TGTGTGGCGC TGGCGTTGAT CATCGCCACC
CTCGGCGTCT ACCAGCACGC CAGCAACCAG TATGTCTATC TGGCCTCGCT GTTCGCGCTC
GGTTTCCTGG TGTTTGGGCC GCAGCTATTA ATTGGCGTGG CGGCAGTCGG TTTCGTACCG
AAAAAAGCCA TCGGCGCTGC GGACGGTATC AAAGGAACCT TCGCTTATCT TATCGGCGAT
AGCTTTGCCA AGCTGGGTCT GGGCATGATT GCCGACGGCA CCCCCGTTTT TGGTCTGACC
GGCTGGGCGG GCACCTTCGC CGCGCTGGAC GCCGCCGCGA TCGGCTGTAT CTGCCTGATG
GCGATGGTCG CCGTGATGGA AGAGCGCAAA ATCCGCCGTG AGAAAAAAAT TCAGCAAGTC
AATATCGCTT AA
 
Protein sequence
MLAFLNQVRK PTLDLPLDVR RKMWFKPFMQ SYLVVFIGYL TMYLIRKNFN IAQNDMISTY 
GLSMTELGMI GLGFSITYGV GKTLVSYYAD GKNTKQFLPF MLILSAICML GFSASMGAGS
TSLFLMIAFY ALSGFFQSTG GSCSYSTITK WTPRRKRGTF LGFWNISHNL GGAGAAGVAL
FGANYLFDGH VIGMFIFPSI IALIVGFIGL RFGSDSPESY GLGKAEELFG EEISEEDKET
EENEMTKWQI FVEYVLKNKV IWLLCFSNIF LYVVRIGIDQ WSTVYAFQEL KLSKEVAIQG
FTLFEVGALV GTLLWGWLSD LANGRRALVA CVALALIIAT LGVYQHASNQ YVYLASLFAL
GFLVFGPQLL IGVAAVGFVP KKAIGAADGI KGTFAYLIGD SFAKLGLGMI ADGTPVFGLT
GWAGTFAALD AAAIGCICLM AMVAVMEERK IRREKKIQQV NIA