Gene SeD_A4113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4113 
SymbolmutM 
ID6871591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3960832 
End bp3961641 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content55% 
IMG OID642787060 
Productformamidopyrimidine-DNA glycosylase 
Protein accessionYP_002217687 
Protein GI198241869 
COG category[L] Replication, recombination and repair 
COG ID[COG0266] Formamidopyrimidine-DNA glycosylase 
TIGRFAM ID[TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0303981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAT TACCCGAAGT TGAAACCAGC CGCCGGGGTA TTGAACCCCA TTTAGTTGGC 
GCTACTATCC TGCACGCCCA TATCCGTAAC GGCCGTCTGC GCTGGCCGGT TTCAGACAAA
ATTTATCGTC TGAGCGATAC ACCCGTCCTT AGCGTTCAGC GTCGTGCTAA ATATTTACTG
CTGGAGCTGC CTGACGGCTG GATAATTATT CACCTGGGGA TGTCGGGAAG CTTGCGGATA
TTGTCGGAAG CGCTGCCGGC GGAAAAGCAC GACCATGTCG ATTTGGTGAT GAGCAACGGC
AAAATTCTAC GTTATACCGA TCCTCGCCGC TTTGGCGCCT GGTTATGGAC CAAAGAGCTG
GAAGGGCATA ACGTACTGGC GCATCTGGGA CCGGAGCCGC TAAGCGATGA GTTTAATGGC
GAATATTTGC AGCAGAAATG CGCGAAGAAG AAGACGGCGA TTAAACCCTG GCTGATGGAT
AACAAGCTGG TGGTCGGCGT GGGGAATATC TACGCCAGCG AGTCGCTGTT TGCCGCTGGT
ATTCACCCTG ACCGCCTGGC GTCGTCACTC TCGACAGAGG AGTGCGACCT GCTGGCACGG
GTGATTAAAG CCGTTTTGCT GCGCTCTATT GAACAAGGCG GGACAACGCT GAAGGATTTT
CTGCAAAGCG ATGGGAAACC GGGCTATTTT GCGCAGGAGT TGCAGGTGTA CGGGCGCAAA
GGCGAGCCGT GTCGGGTATG CGGTACGCCG ATAGTCGCAA CGAAACACGC ACAGCGTGCG
ACGTTCTATT GCCGTCACTG TCAGAAGTAA
 
Protein sequence
MPELPEVETS RRGIEPHLVG ATILHAHIRN GRLRWPVSDK IYRLSDTPVL SVQRRAKYLL 
LELPDGWIII HLGMSGSLRI LSEALPAEKH DHVDLVMSNG KILRYTDPRR FGAWLWTKEL
EGHNVLAHLG PEPLSDEFNG EYLQQKCAKK KTAIKPWLMD NKLVVGVGNI YASESLFAAG
IHPDRLASSL STEECDLLAR VIKAVLLRSI EQGGTTLKDF LQSDGKPGYF AQELQVYGRK
GEPCRVCGTP IVATKHAQRA TFYCRHCQK