Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4097 |
Symbol | rfaF |
ID | 6871416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3945950 |
End bp | 3946996 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642787046 |
Product | ADP-heptose:LPS heptosyltransferase II |
Protein accession | YP_002217673 |
Protein GI | 198243825 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTT TGGTCATTGG CCCGTCCTGG GTGGGCGACA TGATGATGTC GCAAAGTCTC TATCGCACGC TTAAAGCGCG CTATCCCCAG GCGATAATCG ACGTGATGGC GCCAGCCTGG TGTCGTCCGT TGTTATCGCG TATGCCGGAA GTTAACGAGG CGATACCCAT GCCGCTGGGC CACGGCGCGC TGGAAATCGG CGAGCGCCGT AGATTGGGCC ATAGCCTGCG TGAGAAGCGC TACGATCGCG CCTGGGTGCT GCCAAATTCG TTTAAATCGG CGCTGGTTCC TTTCTTTGCC AATATCCCGC ACCGTACCGG CTGGCGCGGC GAAATGCGCT ATGGCCTGCT GAACGATGCG CGCGTCCTTG ATAAAGACGC CTGGCCGCTG ATGGTGGAGC GCTACGTGGC GCTGGCCTAT GACAAGGGGG TGATGCGCAC GGCGAAAGAT CTGCCGCAGC CGCTACTCTG GCCACAGCTC CTGGTTAGCG AGGGTGAAAA GTCGTTGATA CGCAGCGACT TTTCGCTATC TTCTGAACGT CCTCTGATCG GCTTTTGCCC CGGCGCGGAA TTTGGCCCGG CAAAACGTTG GCCGCACTAT CACTACGCCG AACTGGCAAA GCAGCTCATT AACGAAGGGT ACCAGGTCGT ACTGTTTGGC TCGGCAAAAG ACCATGAAGC CGGAAATGAG ATCCTGGCGG CGCTGAATAG CGAGCAGCAG GCATGGTGTC GCAACCTGGC GGGGGAAACC CAGCTGGAAC AGGCCGTCAT TCTGATAGCC GCCTGTAAAG CCATCGTCAC CAACGATTCC GGGCTGATGC ACGTCGCGGC GGCGCTCGAC CGCCCGCTGG TCGCCTTGTA TGGCCCAAGT AGCCCGGATT TCACGCCACC GCTGTCTCAT AAGGCCCGGG TGATTCGTCT CATTACGGGT TATCACAAAG TGCGTAAAGG CGATACGGCG CAAGGCTATC ACCAGAGCCT GATCGATATC ACGCCGCAGC GGGTTCTGGA AGAGCTTCAT TCGCTGTTGT CGGAAGAGGG CGTTTAA
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Protein sequence | MKILVIGPSW VGDMMMSQSL YRTLKARYPQ AIIDVMAPAW CRPLLSRMPE VNEAIPMPLG HGALEIGERR RLGHSLREKR YDRAWVLPNS FKSALVPFFA NIPHRTGWRG EMRYGLLNDA RVLDKDAWPL MVERYVALAY DKGVMRTAKD LPQPLLWPQL LVSEGEKSLI RSDFSLSSER PLIGFCPGAE FGPAKRWPHY HYAELAKQLI NEGYQVVLFG SAKDHEAGNE ILAALNSEQQ AWCRNLAGET QLEQAVILIA ACKAIVTNDS GLMHVAAALD RPLVALYGPS SPDFTPPLSH KARVIRLITG YHKVRKGDTA QGYHQSLIDI TPQRVLEELH SLLSEEGV
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