Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A4083 |
Symbol | |
ID | 6874265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3931354 |
End bp | 3932550 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642787032 |
Product | mandelate racemase/muconate lactonizing enzyme |
Protein accession | YP_002217659 |
Protein GI | 198244336 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.386649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTAA GCGCGAATTC CGACGCCGTA ACGTATGCAA AAGCGGCGAA TACCAGAACC GCGGCAGAAA CCGGCGATCG TATCGAATGG GTGAAGCTAT CACTGGCTTT TCTACCGCTG GCGACGCCAG TGAGTGACGC GAAGGTACTG ACCGGTCGCC AGAAACCTTT GACCGAAGTG GCAATCATCA TTGCCGAAAT CCGCAGTCGC GATGGCTTTG AGGGCGTTGG TTTTAGCTAC TCTAAACGTG CTGGCGGCCA GGGTATTTAT GCTCACGCCA AAGAGATAGC CGATAATCTA CTGGGCGAAG ATCCCAATGA TATCGACAAA ATATACACCA AGCTGCTGTG GGCCGGAGCC TCGGTGGGGC GTAGCGGGAT GGCGGTACAG GCTATCTCCC CTATCGATAT CGCCCTATGG GATATGAAGG CTAAACGTGC CGGTCTGCCA CTGGCAAAAC TGTTGGGCGC GCACCGCGAC TCCGTTCAGT GTTACAACAC CTCAGGGGGG TTCTTGCATA CACCGCTCGA TCAAGTGCTG AAAAATGTGG TGATTTCCCG CGAAAATGGC ATTGGCGGTA TTAAGTTGAA AGTCGGACAA CCCAACTGCG CTGAGGATAT TCGCCGCTTA ACCGCAGTAC GTGAAGCGCT TGGGGATGAG TTCCCGTTAA TGGTTGACGC TAACCAGCAG TGGGATCGCG AAACGGCTAT CCGCATGGGG CGTAAAATGG AACAGTTCAA TCTTATCTGG ATTGAAGAAC CATTAGATGC TTACGACATT GAAGGCCACG CCCAGCTTGC CGCCGCGCTG GATACGCCTA TCGCCACCGG GGAAATGCTG ACCAGTTTCC GGGAACACGA GCAGTTGATT CTGGGCAATG CCAGCGATTT CGTTCAGCCA GATGCGCCGC GTGTCGGCGG TATCTCTCCG TTCCTGAAGA TTATGGATCT GGCGGCGAAA CACGGGCGTA AGCTGGCGCC GCACTTTGCG ATGGAAGTAC ACCTGCACCT TTCCGCAGCG TATCCCCTGG AGCCGTGGCT GGAACATTTC GAGTGGCTGA ACCCATTATT CAACGAGCAA CTTGAGCTGC GCGATGGCCG CATGTGGATT TCCGATCGTC ATGGTCTGGG TTTCACGCTC AGTGAACAAG CGCGCCGCTG GACACAATTA ACATGTGAAT TTGGCAAACG CCCTTAA
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Protein sequence | MALSANSDAV TYAKAANTRT AAETGDRIEW VKLSLAFLPL ATPVSDAKVL TGRQKPLTEV AIIIAEIRSR DGFEGVGFSY SKRAGGQGIY AHAKEIADNL LGEDPNDIDK IYTKLLWAGA SVGRSGMAVQ AISPIDIALW DMKAKRAGLP LAKLLGAHRD SVQCYNTSGG FLHTPLDQVL KNVVISRENG IGGIKLKVGQ PNCAEDIRRL TAVREALGDE FPLMVDANQQ WDRETAIRMG RKMEQFNLIW IEEPLDAYDI EGHAQLAAAL DTPIATGEML TSFREHEQLI LGNASDFVQP DAPRVGGISP FLKIMDLAAK HGRKLAPHFA MEVHLHLSAA YPLEPWLEHF EWLNPLFNEQ LELRDGRMWI SDRHGLGFTL SEQARRWTQL TCEFGKRP
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