Gene SeD_A4079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4079 
Symbol 
ID6871366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3927463 
End bp3928239 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content58% 
IMG OID642787028 
ProductDNA-binding transcriptional repressor LldR 
Protein accessionYP_002217655 
Protein GI198245292 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGTGA TGCCAAAACG CCTGTCAGAC GAGATTGCCT CTCGCGTGCG GGCGCTGATT 
GAAGAACAAA ACCTGGAAGC GGGCATGAAA TTGCCCGCCG AGCGCCAGTT GGCTCTACAG
CTTGGCGTAT CACGCAACTC TTTACGCGAA GCGCTGGCGA AGCTGGTCAG TGAAGGCGTG
CTGGTGAGTC GTCGCGGCGG CGGGACATTT GTCCGCTGGC AGCACGAAAC CTGGTCTGAA
CAGAATATCG TGCAACCGCT GAAAATGCTG ATGGCGAACG ATCCGGACTA CAGTTTCGAC
ATTCTGGAGG CCCGCCACGC CATTGAAGCC AGTACGGCCT GGCACGCCGC CATGCGTGCC
ACCGCTGCCG ACAAAGAGAA AATCAGACTC TGCTTTGATG CGACGCTCAG CGAAGACCCG
GATCTCGCCT CCCAGGCCGA CGTGCGCTTT CATCTGGCGA TCGCGGAAGC CTCGCACAAT
GTGGTGCTGT TGCAAACCAT GCGCGGTTTC TTCGACGTCC TGCAATCCTC CGTCAAACAG
AGTCGCCAGC GTATGTATCT CGTTCCGCCC GTATTCTCAA AGCTGACGGA ACAACACCAG
GCAGTGATGG ACGCCATTCT GGACGGTAAC GCCGAGGGCG CGCGTAAAGC GATGATGGCG
CACCTCAGTT TTGTCCACAC CACGATTAAA CGATTTGATG AAGACCAGGC CCGCCAGGCG
CGTATTACCC GCCTGCCCGG CGACCATAAT GAGATGACCA GGGAGAATAA ATCATGA
 
Protein sequence
MIVMPKRLSD EIASRVRALI EEQNLEAGMK LPAERQLALQ LGVSRNSLRE ALAKLVSEGV 
LVSRRGGGTF VRWQHETWSE QNIVQPLKML MANDPDYSFD ILEARHAIEA STAWHAAMRA
TAADKEKIRL CFDATLSEDP DLASQADVRF HLAIAEASHN VVLLQTMRGF FDVLQSSVKQ
SRQRMYLVPP VFSKLTEQHQ AVMDAILDGN AEGARKAMMA HLSFVHTTIK RFDEDQARQA
RITRLPGDHN EMTRENKS