Gene SeD_A4078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4078 
SymbollldP 
ID6871908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3925811 
End bp3927466 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content58% 
IMG OID642787027 
ProductL-lactate permease 
Protein accessionYP_002217654 
Protein GI198242134 
COG category[C] Energy production and conversion 
COG ID[COG1620] L-lactate permease 
TIGRFAM ID[TIGR00795] L-lactate transport 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCT GGCAACAAAA CTATGACCCG GCGGGTAATA TCTGGCTTTC CAGCCTGATC 
GCATCGCTCC CAATCCTGTT CTTCTTTTTC GCCCTGATTA AACTCAAGCT GAAAGGCTAT
GTTGCCGCTT CGTGGACGGT GGTTATCGCG CTCGCCGTCG CGCTGCTGTT CTATAAAATG
CCGGTCGATC ACGCGCTGGC ATCGGTCGTG TATGGCTTCT TCTACGGGCT ATGGCCGATA
GCCTGGATAA TCATCGCCGC GGTCTTTGTC TATAAAATTT CGGTCAAGAC CGGGCAGTTT
GACATTATTC GCTCGTCAAT TCTGTCGATT ACCCCCGACC AACGTCTGCA AATGCTGATT
GTCGGCTTCT GCTTCGGCGC GTTCCTTGAA GGCGCGGCGG GTTTCGGCGC GCCGGTGGCG
ATAACCGCCG CGCTGCTGGT GGGTCTGGGC TTTAATCCGC TGTATGCGGC AGGGCTGTGC
CTGATTGTAA ACACCGCGCC TGTCGCCTTT GGCGCGATGG GGATCCCGAT TCTGGTTGCC
GGACAGGTCA CGGGCCTGGA CAGCTTTGAA ATCGGTCAGA TGGTCGGTCG TCAGCTACCG
TTCCTGACCA TTATCGTGCT GTTCTGGATT ATGGCGATTA TGGACGGCTG GCGCGGCGTG
AAAGAAACCT GGCCTGCGGT GATGGTCGCT GGCGGCTCGT TTGCTATCGC CCAGTATCTC
AGCTCCAACT TTATCGGGCC GGAACTGCCG GACATCATCT CTTCACTGGT GTCTCTGGTG
TGTCTGACGC TGTTCCTCAA ACGCTGGCAG CCGGTACGCA TCTTCCGCTT CGGCGATATG
GGCGCGTCGC AGGTCGATCA GACGCTGGCC CGCACCCGCT ATACGACAGG GCAAATTGTT
CGCGCCTGGT CGCCGTTTCT GTTCCTGACC GCCACGGTCA CTCTCTGGAG CGTACCGCCG
TTTAAAGCGT TGTTTGCCCC CGGCGGCGCG CTGTATGACT GGGTAATTAA CGTTCCGGTA
CCGTATCTCG ATAAACTGGT CGCCCGTATG CCGCCGGTCG TACACGAAGC GACCGCTTAC
GCGGCGGTGT ATAAATTTGA CTGGTTCTCC GCCACCGGCA CGGCGATCCT GTTTGCCGCG
CTGTTGTCTA TCGTCTGGCT GAAAATGAAG CCCTCAGCCG CAATCCAGAC CTTTGGCAGC
ACGCTGAAAG AGCTGGCGTT GCCGATTTAC TCCATCGGCA TGGTGCTGGC GTTCGCGTTT
ATCTCGAACT ATTCCGGGCT TTCCTCCACG CTGGCGTTAG CGCTGGCGCA CACCGGCAGC
GCCTTCACGT TCTTCTCGCC GTTCCTCGGC TGGCTGGGTG TCTTCCTGAC CGGTTCGGAT
ACCTCATCTA ACGCGCTGTT TGCCTCTCTA CAGGCTACCG CGGCGCAGCA AATCGGCGTC
TCTGATGTAC TGATGGTGGC GGCGAACACC ACTGGAGGCG TAACCGGGAA GATGATCTCG
CCGCAGTCTA TCGCCATCGC CTGCGCGGCG GTGGGACTGG TAGGGAAAGA GTCCGATCTG
TTCCGTTTTA CCGTCAAACA CAGCCTGATC TTCACCTGTA TGGTGGGCGT GATCACTACG
CTTCAGGCCT ATGTTTTAAC CTGGATGATT CCGTGA
 
Protein sequence
MNLWQQNYDP AGNIWLSSLI ASLPILFFFF ALIKLKLKGY VAASWTVVIA LAVALLFYKM 
PVDHALASVV YGFFYGLWPI AWIIIAAVFV YKISVKTGQF DIIRSSILSI TPDQRLQMLI
VGFCFGAFLE GAAGFGAPVA ITAALLVGLG FNPLYAAGLC LIVNTAPVAF GAMGIPILVA
GQVTGLDSFE IGQMVGRQLP FLTIIVLFWI MAIMDGWRGV KETWPAVMVA GGSFAIAQYL
SSNFIGPELP DIISSLVSLV CLTLFLKRWQ PVRIFRFGDM GASQVDQTLA RTRYTTGQIV
RAWSPFLFLT ATVTLWSVPP FKALFAPGGA LYDWVINVPV PYLDKLVARM PPVVHEATAY
AAVYKFDWFS ATGTAILFAA LLSIVWLKMK PSAAIQTFGS TLKELALPIY SIGMVLAFAF
ISNYSGLSST LALALAHTGS AFTFFSPFLG WLGVFLTGSD TSSNALFASL QATAAQQIGV
SDVLMVAANT TGGVTGKMIS PQSIAIACAA VGLVGKESDL FRFTVKHSLI FTCMVGVITT
LQAYVLTWMI P