Gene SeD_A4029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4029 
Symbol 
ID6875005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3873606 
End bp3874580 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content57% 
IMG OID642786979 
Product2-ketogluconate reductase 
Protein accessionYP_002217606 
Protein GI198244955 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0243111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCGT CCATCATTCT CTACAAAACC CTGCCTGATG ATTTGCTGCA TCGCCTGGAG 
GCGCATTTTA CCGTCACCCA GGTACCGAAC CTGCATCCGG AAACGGTAGC GCGACACGCG
CAGGCATTTG CCAGCGCGCA AGGCCTTCTG GGCGCCAGCG AAACCGTTAA CCGCGCGCTG
CTGGAAAAAA TGCCGGCGCT ACGCGCGGCG TCAACCATCT CGGTGGGATA CGATAATGTC
GAGGTGGACG CCCTTACTGC CCGCAAAATA GTCCTGATGC ACACGCCTGC CGTTTTGACG
GAAACCGTTG CCGATACGGT GATGGCATTG ATGCTGGCCA CTGCCCGCCG CGTGGTGGAC
GTCGCAGAAC GGGTTAAGGC GGGTGAATGG ACAGAAAGCA TTGGCCCGGC ATGGTTTGGC
GTCGATGTGC ATCACAAAAC ACTCGGTATC GTTGGGATGG GGCGTATCGG GATGGCGCTG
GCGCAGCGAG CGCACTTTGG GTTTACCATG CCGGTTCTCT ATCACGCCCG TCGGCGGCAT
CAGGAGGCGG AGGACCGGTT TAACGCCCGC TACTGCGATC TGGATACGTT GTTGCAGGAG
GCTGATTTTG TCTGCGTGAT CCTGCCGCTA ACGGCAGAAA CGCGACATCT GTTTGGCGCA
ACACAGTTTG CCAGAATGAA ATCGTCCGCC ATTTTTATTA ATGCCGGACG CGGCCCGGTG
GTCGATGAAA ACGCGCTGAT TGCCGCGCTG CAAAACGGTG AAATATATGC GGCAGGTCTG
GATGTCTTTG AACAGGAACC GCTATCTGTG GATTCGCCCC TGCTGAACAT GTCTAATGTC
GTCGCGGTGC CGCATATTGG CTCGGCAACG CATGAGACGC GCTACAACAT GATGGCCTGT
GCGGTGGATA ATTTGATTGA TGCGCTGCAG GGAAAAATAG AGAAGAACTG CGTCAACCCG
CAGGCGGCGG GATAG
 
Protein sequence
MKPSIILYKT LPDDLLHRLE AHFTVTQVPN LHPETVARHA QAFASAQGLL GASETVNRAL 
LEKMPALRAA STISVGYDNV EVDALTARKI VLMHTPAVLT ETVADTVMAL MLATARRVVD
VAERVKAGEW TESIGPAWFG VDVHHKTLGI VGMGRIGMAL AQRAHFGFTM PVLYHARRRH
QEAEDRFNAR YCDLDTLLQE ADFVCVILPL TAETRHLFGA TQFARMKSSA IFINAGRGPV
VDENALIAAL QNGEIYAAGL DVFEQEPLSV DSPLLNMSNV VAVPHIGSAT HETRYNMMAC
AVDNLIDALQ GKIEKNCVNP QAAG