Gene SeD_A4025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4025 
Symbol 
ID6871067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3869271 
End bp3869852 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content52% 
IMG OID642786975 
Product3-methyl-adenine DNA glycosylase I 
Protein accessionYP_002217602 
Protein GI198242393 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID[TIGR00624] DNA-3-methyladenine glycosylase I 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.612137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGTT GCGACTGGGT CAGCCAGGAC CCCCTTTATA TTGCCTATCA TGATAACGAG 
TGGGGCGTAC CGGAAACTGA CAGCAGAAAG CTGTTTGAAA TGATCTGTCT TGAAGGTCAA
CAGGCCGGTT TATCCTGGAT CACCGTGCTT AAAAAGAGAG AGAACTATCG CGCCTGTTTT
CATCAGTTTG ACCCGGTACG CATCGCAGCT ATGCAGGAGG AGGATGTTGA ACGCCTGCTG
CAGAACACGG GCATCATACG ACATCGCGGT AAAATTCAGG CCATTATCAG TAACGCCCGC
GCCTGGCTTG CGATGGAGCA AAACGGCGAG TCTTTCGCCG ATTTTGTCTG GTCATTCGTT
GATGGCCAGC CGCAGATCAC CCAGGCGGCC AGCCTGGATA AGATCCCCAC CTCAACACCT
GCGTCCGATG CGCTTGCTAA GGCATTGAAA AAACGCGGTT TCAAGTTTGT CGGTACGACT
ATCTGTTACT CCTTTATGCA GGCGTGCGGA CTGGTCAACG ACCATATTAC CGGCTGTTTT
TGCCATCCGG GAGAAAAACA TGATTCGCAA ATCCCAGAGT GA
 
Protein sequence
MQRCDWVSQD PLYIAYHDNE WGVPETDSRK LFEMICLEGQ QAGLSWITVL KKRENYRACF 
HQFDPVRIAA MQEEDVERLL QNTGIIRHRG KIQAIISNAR AWLAMEQNGE SFADFVWSFV
DGQPQITQAA SLDKIPTSTP ASDALAKALK KRGFKFVGTT ICYSFMQACG LVNDHITGCF
CHPGEKHDSQ IPE