| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3973 |
|---|
| Symbol | |
|---|
| ID | 6871047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 3809767 |
|---|
| End bp | 3810810 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642786930 |
|---|
| Product | L-asparaginase |
|---|
| Protein accession | YP_002217558 |
|---|
| Protein GI | 198244963 |
|---|
| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
|---|
| TIGRFAM ID | [TIGR00520] L-asparaginases, type II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCA GAGTTTTCAT GGCCACCGTG TTGCTGCTCA TCAGCCACTG TGTATTTAGC
ACAACGTCAC TACCGCATAT TGTTATTCTC GCGACAGGCG GTACCATCGC CGGGACGGCA
GCCAATAATA CGCAAACCGC CGGATATAAA TCCGGTGAAC TTGGCGTGCA AACATTAATA
AATGCCGTGC CGGAAATGAA TAATATCGCT CGCGTTGACG GCGAGCAGGT GGCGAATATT
GGTAGCGAAA ATATGACCAG CGATATCATC CTGAAACTTT CACAGAAGGT GAATGCGTTA
TTGGCGCGGG ACGATGTTGA CGGTGTGGTT ATTACTCATG GCACTGACAC GCTCGATGAA
ACCGCCTACT TTCTTAATTT GACCGTGAAA AGCGACAAAC CGGTGGTGTT TACCGCTGCA
ATGCGGCCCG CGTCGGCAAT CAGCGCCGAT GGCGCAATGA ACCTGCTGGA AGCGGTCACG
GTGGCTGCTG ACCCGAATGC GAAGGGACGC GGTGTAATGG TCGTTTTAAA CGATCGTATT
GGTTCGGCGC GCTTTGTAAC GAAAACCAAT GCCACGACTC TGGATACCTT TAAAGCGCCG
GAAGAGGGCT ATCTGGGGGT CATCGTTAAT GGTAAGCCAC AGTTCGAAAC GCGGGTGGAA
AAAATTCATA CCCTGCGATC TGTTTTTGAC GTACGTAATA TCAAAAAATT ACCCAATGTG
GTGATTATTT ACGGCTATCA GGACGACCCG GAATATATGT ATGATGCGGC GATCGCCCAT
CACGCGGACG GTATTATTTA TGCCGGAACC GGCGCAGGTT CGGTCTCGGT ACGCAGCGAC
GCGGGGATTA AAAAAGCGGA GAAAGCCGGG ATTATCGTGG TGCGCGCTTC CCGCACCGGA
AACGGCGTCG TACCGTTGGA TAAAGGGCAG CCAGGGCTGG TGTCTGACTC GCTCAACCCG
GCGAAGGCGC GAGTCTTGCT GATGACGGCA TTAACTCAGA CGCGTAATCC GGAACTGATC
CAGAGTTATT TCAGTACGTA TTAA
|
|---|
| Protein sequence | MKIRVFMATV LLLISHCVFS TTSLPHIVIL ATGGTIAGTA ANNTQTAGYK SGELGVQTLI
NAVPEMNNIA RVDGEQVANI GSENMTSDII LKLSQKVNAL LARDDVDGVV ITHGTDTLDE
TAYFLNLTVK SDKPVVFTAA MRPASAISAD GAMNLLEAVT VAADPNAKGR GVMVVLNDRI
GSARFVTKTN ATTLDTFKAP EEGYLGVIVN GKPQFETRVE KIHTLRSVFD VRNIKKLPNV
VIIYGYQDDP EYMYDAAIAH HADGIIYAGT GAGSVSVRSD AGIKKAEKAG IIVVRASRTG
NGVVPLDKGQ PGLVSDSLNP AKARVLLMTA LTQTRNPELI QSYFSTY
|
|---|
| |