Gene SeD_A3968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3968 
Symbol 
ID6875574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3803715 
End bp3805757 
Gene Length2043 bp 
Protein Length680 aa 
Translation table11 
GC content56% 
IMG OID642786925 
Productoligopeptidase A 
Protein accessionYP_002217553 
Protein GI198246092 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0339] Zn-dependent oligopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATC CATTACTAAC GTCTTTTTCA CTGCCGCCTT TTTCTGCAAT TAAACCGGAG 
CATGTGGTGC CTGCGGTCAC CAAAGCGTTG GCCGATTGCC GGGCGGCGGT AGAAGGCGTT
GTGGCGCATG GCGCGCCGTA TAGCTGGGAA AACCTCTGCC AGCCGTTGGC GGAAGCCGAC
GATGTTCTGG GGCGTATTTT CTCGCCAATT AGCCACTTAA ACTCGGTGAA AAATAGTCCG
GAGCTGCGTG AAGCCTACGA ACAGACGCTG CCGCTGCTGT CGGAATACAG CACCTGGGTT
GGCCAGCATG AAGGGTTGTA CAACGCGTAC CGCGACCTGC GCGACGGCGA TCATTACGCC
ACTCTGAATA CCGCGCAGAA GAAAGCGGTT GATAACGCGC TGCGTGATTT TGAACTGTCC
GGCATCGGCC TGCCGAAAGA GAAACAGCAG CGTTACGGCG AAATCGCCAC TCGCCTGTCT
GAGCTGGGCA ACCAGTACAG CAATAATGTG CTCGATGCCA CTATGGGCTG GACGAAGCTC
ATCACCGATG AAGCCGAGCT GGCGGGAATG CCGGAAAGCG CTCTGGCGGC AGCTAAAGCC
CAGGCGGAAG CCAAAGAGCA GGAAGGTTAC CTGCTGACTC TGGATATCCC GAGCTATCTG
CCAGTGATGA CCTACTGCGA CAACCAGGCG TTGCGTGAAG AGATGTATCG CGCCTATTCC
ACTCGCGCCT CCGACCAGGG GCCGAACGCC GGTAAGTGGG ATAACAGCCC GGTGATGGAA
GAAATTCTTG CGCTGCGCCA TGAACTGGCG CAACTGCTGG GCTTCGAAAA TTATGCCCAT
GAGTCACTGG CCACCAAGAT GGCGGAAAAT CCGCAGCAGG TGCTCGATTT CTTAACCGAT
CTGGCGAAAC GCGCCCGTCC GCAGGGGGAA AAAGAGCTGG CCCAGCTGCG CGCCTTCGCC
AAAGCCGAAT TTGGCGTTGA GGAACTGCAA CCGTGGGATA TCGCGTACTA CAGTGAAAAG
CAAAAACAGC ACCTGTACAG CATCAGCGAT GAGCAGCTAC GTCCGTACTT CCCGGAAAAC
AAAGCCGTGA ATGGCCTGTT TGAAGTGGTG AAACGTATTT ACGGCATCAC TGCCAAAGAG
CGTACTGACG TTGATGTCTG GCACCCGGAA GTGCGTTTCT TTGAACTGTA TGACGAAAAT
AACGAGCTGC GCGGCAGCTT CTACCTTGAC CTGTACGCGC GCGAACACAA ACGCGGCGGG
GCGTGGATGG ACGACTGTGT CGGCCAGATG CGTAAGGCGG ACGGCACATT GCAAAAGCCG
GTCGCTTATC TGACCTGTAA TTTCAACCGT CCGGTGAACG GTAAACCCGC TCTGTTTACC
CATGACGAAG TGATCACCCT GTTCCACGAG TTTGGTCATG GCCTGCATCA TATGCTGACC
CGCATTGAGA CCGCCGGGGT CTCCGGTATC AGCGGCGTGC CGTGGGACGC GGTCGAACTG
CCAAGCCAGT TTATGGAAAA CTGGTGCTGG GAGCCGGAAG CGCTGGCGTT TATCTCCGGC
CACTATGAGA CCGGCGAACC GCTGCCGAAG GAACTGCTGG ATAAAATGCT GGCGGCGAAA
AACTATCAGG CGGCGCTGTT TATTCTGCGT CAACTGGAGT TCGGTCTGTT TGATTTCCGT
CTGCATGCGG AATTTAACCC GCAGCAAGGA GCGAAAATTC TTGAGACGCT CTTTGAAATT
AAAAAACAGG TCGCCGTGGT GCCGTCACCG ACATGGGGCC GCTTCCCACA TGCATTCAGC
CATATCTTTG CTGGCGGCTA TGCGGCAGGC TACTACAGCT ATCTGTGGGC CGACGTACTG
GCGGCGGACG CTTATTCCCG CTTTGAGGAG GAAGGCATTT TCAACCGTGA GACCGGTCAG
TCGTTCCTTG ATAACATCCT GACTCGTGGT GGTTCTGAAG AGCCGATGGA ACTCTTTAAA
CGCTTCCGTG GCCGTGAACC ACAGCTGGAC GCGATGCTGG AGCATTACGG GATTAAAGGC
TGA
 
Protein sequence
MTNPLLTSFS LPPFSAIKPE HVVPAVTKAL ADCRAAVEGV VAHGAPYSWE NLCQPLAEAD 
DVLGRIFSPI SHLNSVKNSP ELREAYEQTL PLLSEYSTWV GQHEGLYNAY RDLRDGDHYA
TLNTAQKKAV DNALRDFELS GIGLPKEKQQ RYGEIATRLS ELGNQYSNNV LDATMGWTKL
ITDEAELAGM PESALAAAKA QAEAKEQEGY LLTLDIPSYL PVMTYCDNQA LREEMYRAYS
TRASDQGPNA GKWDNSPVME EILALRHELA QLLGFENYAH ESLATKMAEN PQQVLDFLTD
LAKRARPQGE KELAQLRAFA KAEFGVEELQ PWDIAYYSEK QKQHLYSISD EQLRPYFPEN
KAVNGLFEVV KRIYGITAKE RTDVDVWHPE VRFFELYDEN NELRGSFYLD LYAREHKRGG
AWMDDCVGQM RKADGTLQKP VAYLTCNFNR PVNGKPALFT HDEVITLFHE FGHGLHHMLT
RIETAGVSGI SGVPWDAVEL PSQFMENWCW EPEALAFISG HYETGEPLPK ELLDKMLAAK
NYQAALFILR QLEFGLFDFR LHAEFNPQQG AKILETLFEI KKQVAVVPSP TWGRFPHAFS
HIFAGGYAAG YYSYLWADVL AADAYSRFEE EGIFNRETGQ SFLDNILTRG GSEEPMELFK
RFRGREPQLD AMLEHYGIKG