Gene SeD_A3962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3962 
Symbol 
ID6875266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3796841 
End bp3798037 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content56% 
IMG OID642786919 
Producthypothetical protein 
Protein accessionYP_002217547 
Protein GI198245160 
COG category[R] General function prediction only 
COG ID[COG2081] Predicted flavoproteins 
TIGRFAM ID[TIGR00275] flavoprotein, HI0933 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.327369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAAGGT TTGATGCCGT TATTATAGGC GCTGGCGCAG CGGGCATGTT TTGCGCCGCG 
CAGGCAGGAC AGGCGGGTAG CCGCGTGCTG CTCATCGATA ATGGCAAGAA GCCAGGACGT
AAAATCCTCA TGTCCGGTGG TGGACGCTGC AACTTTACTA ATCTTTATGT TGAGCCTGCT
GCGTATTTGA GCCAGAACCC CCATTTTTGC AAATCAGCAT TAGCCCGCTA TACCCAGTGG
GACTTTATCG ATCTGGTCGG CAGGTATGGG ATAGCCTGGT ATGAGAAAAC GCTGGGACAG
CTTTTTTGCG ATGATTCCGC CCAACGCATT GTCGATATGC TGGTTGCCGA GTGCGACAAA
GGCGGCGTAA CGATGCGCCT GCGTAGCGAG GTATTGAGCG TCGAGCGTGA TGAGTCGGGT
TTCATACTGG CGTTGAACGG CGAGACGGTG ACTACGCAAA AGTTGGTGAT TGCCAGCGGC
GGCCTGTCGA TGCCGGGGCT TGGCGCATCA CCGTTTGGCT ATAAAATCGC CGAACAGTTT
GGTCTCAAGG TGTTGCCGAC GCGCGCCGGG CTGGTGCCCT TTACGCTACA TAAGCCGCTG
TTAGAACAGC TCCAGACGCT GTCTGGCGTC TCTGTGCCCT GCGTGATTAC CGCCCGCAAT
GGCACGGTAT TTCGGGAAAA CCTACTTTTT ACCCATCGTG GGCTGTCCGG CCCCGCCGTT
TTACAGATTT CCAGCTACTG GCAACCGGGC GAGTTAGTGA GCATTAACTT ATTGCCGGAC
CTCTCGCTGG AAGATGTTCT CAATGAACAG CGTAACGCGC ACCCGAACCA GAGTCTGAAG
AACACGCTGG CGATGCATTT GCCGAAACGG TTGGTGGAGT GTTTACAACA GTTGGGGCAG
ATCCCGGATG TATCGCTCAG ACAGTTGAAC GTTCGTGACC AGCAGGCGTT GGTTGACACG
CTTACGGCCT GGCAAGTGCA GCCTAACGGC ACCGAAGGCT ATCGGACAGC GGAAGTGACG
CTGGGCGGCG TGGATACAAA CGAACTATCA TCGCGGACTA TGGAAGCGCG CCGCGTGCCG
GGTCTCTATT TTATCGGCGA AGTGATGGAC GTCACCGGCT GGTTGGGCGG CTATAACTTC
CAGTGGGCGT GGTCGAGCGC CTGGGCCTGC GCGCAGGATT TGGCGGCAAA ACGCTAA
 
Protein sequence
MERFDAVIIG AGAAGMFCAA QAGQAGSRVL LIDNGKKPGR KILMSGGGRC NFTNLYVEPA 
AYLSQNPHFC KSALARYTQW DFIDLVGRYG IAWYEKTLGQ LFCDDSAQRI VDMLVAECDK
GGVTMRLRSE VLSVERDESG FILALNGETV TTQKLVIASG GLSMPGLGAS PFGYKIAEQF
GLKVLPTRAG LVPFTLHKPL LEQLQTLSGV SVPCVITARN GTVFRENLLF THRGLSGPAV
LQISSYWQPG ELVSINLLPD LSLEDVLNEQ RNAHPNQSLK NTLAMHLPKR LVECLQQLGQ
IPDVSLRQLN VRDQQALVDT LTAWQVQPNG TEGYRTAEVT LGGVDTNELS SRTMEARRVP
GLYFIGEVMD VTGWLGGYNF QWAWSSAWAC AQDLAAKR